Query= MSMg01no391_j16.b1 MSMg01no391_j16.b1 CHROMAT_FILE:
MSMg01no391_j16.b1 PHD_FILE: MSMg01no391_j16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:53 2005
(468 letters)
>mm_chr7_104226100_104226971
Length = 872
Score = 878 bits (454), Expect = 0.0
Identities = 466/472 (98%), Gaps = 4/472 (0%)
Strand = Plus / Minus
Query: 1 ctacatagtgagctcctgtctcaaaaactggagaaca----aaacaaaggaccattgtta 56
|||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 672 ctacatagtgagctcctgtctcaaaaactggaaaacaaaacaaacaaaggaccattgtta 613
Query: 57 cttcttctgtggtattagcctcctaggacatggcttcaacagcgctgaggatgacagtgt 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 cttcttctgtggtattagcctcctaggacatggcttcaacagcgctgaggatgacagtgt 553
Query: 117 tactggagtcattagatgaaaacctagtccctggcaaccttagcaagctacagtcatctg 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tactggagtcattagatgaaaacctagtccctggcaaccttagcaagctacagtcatctg 493
Query: 177 tcctcatatgacaataaagagaccattaatggtgaaaagctgagaaaggaaatgtatcca 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tcctcatatgacaataaagagaccattaatggtgaaaagctgagaaaggaaatgtatcca 433
Query: 237 gagtggccatactgagaaacaaaaagctacagtgacctaactcctaaccccaagtcctaa 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gagtggccatactgagaaacaaaaagctacagtgacctaactcctaaccccaagtcctaa 373
Query: 297 ccccaaggagaacactgacttgaggcttaggtttaaatagagggtaaaaggcataagtaa 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ccccaaggagaacactgacttgaggcttaggtttaaatagagggtaaaaggcataagtaa 313
Query: 357 ctaagttacttctactaattatagttataattctaactaaccaggtgtggtcctatcaat 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ctaagttacttctactaattatagttataattctaactaaccaggtgtggtcctatcaat 253
Query: 417 caccgaccaatcattgtcttagctccagtttatcttggaagttgtccccctg 468
||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 caccggccaatcattgtcttagctccagtttatcttggaagttgtccccctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 872
Length adjustment: 10
Effective length of query: 458
Effective length of database: 862
Effective search space: 394796
Effective search space used: 394796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_j16.g1 MSMg01no391_j16.g1 CHROMAT_FILE:
MSMg01no391_j16.g1 PHD_FILE: MSMg01no391_j16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:53 2005
(240 letters)
>mm_chr7_104056149_104056787
Length = 639
Score = 445 bits (230), Expect = e-129
Identities = 236/238 (99%), Gaps = 1/238 (0%)
Strand = Plus / Plus
Query: 1 ttcattaaagaaccccaggcaggagtggttttgtttttgtttttaaataagaagaaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcattaaagaaccccaggcaggagtggttttgtttttgtttttaaataagaagaaagag 260
Query: 61 ctctttggtttggcctagcagggtcatacaaccccactgagatcagggatggcggtgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctttggtttggcctagcagggtcatacaaccccactgagatcagggatggcggtgcca 320
Query: 121 gagctggtacccatggacccagaaggccaggctagcattgttcctgtgaagacttgtgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 gagctggtacccatggacccagaaggccaggctagcattgttcctgtgaagacctgtgta 380
Query: 181 catggcatttggacgagagttaggcataggcgcagccagtgctggaggaccggccaga 238
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 catggcatttggacgagagt-aggcataggcgcagccagtgctggaggaccggccaga 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 639
Length adjustment: 9
Effective length of query: 231
Effective length of database: 630
Effective search space: 145530
Effective search space used: 145530
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
