Query= MSMg01no392_h13.b1 MSMg01no392_h13.b1 CHROMAT_FILE:
MSMg01no392_h13.b1 PHD_FILE: MSMg01no392_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:00 2005
(455 letters)
>mm_chr7_130683650_130684504
Length = 855
Score = 690 bits (357), Expect = 0.0
Identities = 360/361 (99%)
Strand = Plus / Minus
Query: 1 aatgcataactacctaaaaataataaccagtcttattatggaagaaaggagtgattcccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatgcataactacctaaaaataataaccagtcttattatggaagaaaggagtgattcccc 302
Query: 61 caggaagataaggattatgctattaaaataaagaacagatgttcaaccagcaagaatagc 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 301 caggaagataaggattatgctattaaaatgaagaacagatgttcaaccagcaagaatagc 242
Query: 121 agatgtctcacaggaatcaagttggagaattccttccctagtgttactaaaccaggctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agatgtctcacaggaatcaagttggagaattccttccctagtgttactaaaccaggctca 182
Query: 181 tttttctctccatatgataggctaaccagtgaaggaatgaattttgcaaaagagggagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttttctctccatatgataggctaaccagtgaaggaatgaattttgcaaaagagggagga 122
Query: 241 cttctttgtggagcaccaactaaagacagtggacaaacaacacatctgcctccctgagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttctttgtggagcaccaactaaagacagtggacaaacaacacatctgcctccctgagaa 62
Query: 301 caggaatatttgcagcataaagaattaatatggactgaggtatggaaaaaggtgattgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caggaatatttgcagcataaagaattaatatggactgaggtatggaaaaaggtgattgga 2
Query: 361 g 361
|
Sbjct: 1 g 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_h13.g1 MSMg01no392_h13.g1 CHROMAT_FILE:
MSMg01no392_h13.g1 PHD_FILE: MSMg01no392_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:00 2005
(429 letters)
>mm_chr7_130492176_130493002
Length = 827
Score = 785 bits (406), Expect = 0.0
Identities = 421/426 (98%), Gaps = 2/426 (0%)
Strand = Plus / Plus
Query: 1 tcccaagtaaaacacaggcggaaaagaagtagaacaaaggacccaggatctaaaggatac 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcccaagtaaaacacagg-ggaaaagaagtagaacaaaggacccaggatctaaaggatac 259
Query: 61 aaatcaaaagtctatcatgcatgttattaatcccaggtagggaaatgaggaagcagggac 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaatcaaaagtctatcatgcacgttattaatcccaggtagggaaatgaggaagcagggac 319
Query: 121 agaaggagcatgtagagtcaacacctaagaattctctaaaaaacaaaccgagcagaggct 180
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 320 agaaggagcgtgtagagtcaacacctaagaattttctaaaaaacaaaccgagcagaggct 379
Query: 181 ggagagaccaggccccaaactcttacaactcctacagaaccctgaaaatagaacctacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggagagaccaggccccaaactcttacaactcctacagaaccctgaaaatagaacctacaa 439
Query: 241 cacccacaaatttatctggaagaccccttccaggaatgtactggctctttagggtggggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cacccacaaatttatctggaagaccccttccaggaatgtactggctctttagggtggggg 499
Query: 301 catatatgtctaagagttatgcctggagccaacttcagccaccaacaaagacctgagcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 catatatgtctaagagttatgcctggagccaacttcagccaccaacaaagacctgagcaa 559
Query: 361 ccatgaacaaattaattacacagcaggtaagagcaacctgctacccaattgccaagagtg 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 560 ccatgaacaaattaattacacagcaggtaagagca-cctgctacccaattgccaagagtg 618
Query: 421 gaggtc 426
||||||
Sbjct: 619 gaggtc 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 827
Length adjustment: 9
Effective length of query: 420
Effective length of database: 818
Effective search space: 343560
Effective search space used: 343560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
