Query= MSMg01no396_f13.b1 MSMg01no396_f13.b1 CHROMAT_FILE:
MSMg01no396_f13.b1 PHD_FILE: MSMg01no396_f13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:27 2005
(441 letters)
>mm_chr7_100206596_100207436
Length = 841
Score = 598 bits (309), Expect = e-175
Identities = 328/335 (97%), Gaps = 2/335 (0%)
Strand = Plus / Minus
Query: 1 tggaatagtgaataccaaggtttgtgaaaatatgaggagagatggaaagacattgatcca 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 333 tggaatagtgaataccaaggtttgtgaaagtatgaggagagatggaaagacattgatcca 274
Query: 61 agggcagaaaacattatggagaccagatgcaatgttcctaagatctattttggtctgcac 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 273 agggcagaaagcattatggagaccagatgcaatgttcctaagatctattttggtctgtac 214
Query: 121 tggtttttaatagttatttttccttttattaaacatagattcttttttcatacaatatca 180
|||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 213 tggtttttaatagttatttttccttttattaaacatagat--ttttttcctacaatatca 156
Query: 181 ttgtaatagttttccatccttctactcctcacactttctcctcaccccatcttccatcca 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ttttaatagttttccatccttctactcctcacactttctcctcaccccatcttccatcca 96
Query: 241 aatctactctctccttctgtctcttactagaaaagaacttgcttctaggaaacaagaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 aatctactctctccttctgtctcttactagaaaagaacttgcttctaggaaacaagaaca 36
Query: 301 aaacataataagataaaatgtaagataaaacaaaa 335
|||||||||||||||||||||||||||||||||||
Sbjct: 35 aaacataataagataaaatgtaagataaaacaaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no396_f13.g1 MSMg01no396_f13.g1 CHROMAT_FILE:
MSMg01no396_f13.g1 PHD_FILE: MSMg01no396_f13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:27 2005
(341 letters)
>mm_chr7_100006714_100007454
Length = 741
Score = 592 bits (306), Expect = e-173
Identities = 330/338 (97%)
Strand = Plus / Plus
Query: 1 tttggtggaagcctgcaactggagttgactgtgaacatggaacaaagtcttggctttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttggtggaagcctgcaactggagttgactgtgaacatggaacaaagtcttggctttctt 260
Query: 61 caaaatcacattctgagtctgactgagaccttggtcttgaataccttgagggtgatatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaaatcacattctgagtctgactgagaccttggtcttgaataccttgagggtgatatgc 320
Query: 121 tttgcaaggatagtttttgtgaaggctggccgcggttctcatttataggataattttctg 180
|||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 tttgcaaggataatttttgtgaaggctggccacggttctcatttataggataattttctg 380
Query: 181 tgcaaggtacttccagtggtaacaagctatcctgtggtattttagtaatttctgttccaa 240
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 381 tgcaaggtacttccagtggtaacaagttatcctgtggtattttggtaatttctgttccaa 440
Query: 241 tgttcttttttttagcaatataatcaaaaagatcagcagaagcattgtaactaccttcat 300
||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtccttatcgttagcaatataatcaaaaagatcagcagaagcattgtaactaccttcat 500
Query: 301 gatcaccagaagaacttggtgttaagttattattgcta 338
||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatcaccagaagaacttggtgttaagttattattgcta 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
