| Query= MSMg01no397_n04.g1 MSMg01no397_n04.g1 CHROMAT_FILE:
MSMg01no397_n04.g1 PHD_FILE: MSMg01no397_n04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:23 2005
(246 letters)
>mm_chr7_3524447_3525092
Length = 646
Score = 466 bits (241), Expect = e-136
Identities = 244/245 (99%)
Strand = Plus / Plus
Query: 1 caaggataaaggtgacctttacttcaattggttggctctatctccagagaagccccagaa 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 39 caaggataaaggtgacctttacttcatttggttggctctatctccagagaagccccagaa 98
Query: 61 tggttgctagggggctggaaattgttgccgactctgcccttgcctcaggccaggtggtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 tggttgctagggggctggaaattgttgccgactctgcccttgcctcaggccaggtggtag 158
Query: 121 ggcagcctctgatggtgaggcagtttctgattggctgcctgaggccaggtggtgggcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 ggcagcctctgatggtgaggcagtttctgattggctgcctgaggccaggtggtgggcagc 218
Query: 181 ctctgatggtgaggcagtttctgattggctgcctgaggccaggtggtgggcagcctctga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ctctgatggtgaggcagtttctgattggctgcctgaggccaggtggtgggcagcctctga 278
Query: 241 tggtg 245
|||||
Sbjct: 279 tggtg 283
Score = 265 bits (137), Expect = 2e-75
Identities = 143/145 (98%), Gaps = 1/145 (0%)
Strand = Plus / Plus
Query: 101 tgcctcaggccaggtggtagggcagcctctgatggtgaggcagtttctgattggctgcct 160
||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tgcctgaggccaggtggt-gggcagcctctgatggtgaggcagtttctgattggctgcct 306
Query: 161 gaggccaggtggtgggcagcctctgatggtgaggcagtttctgattggctgcctgaggcc 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gaggccaggtggtgggcagcctctgatggtgaggcagtttctgattggctgcctgaggcc 366
Query: 221 aggtggtgggcagcctctgatggtg 245
|||||||||||||||||||||||||
Sbjct: 367 aggtggtgggcagcctctgatggtg 391
Score = 265 bits (137), Expect = 2e-75
Identities = 143/145 (98%), Gaps = 1/145 (0%)
Strand = Plus / Plus
Query: 101 tgcctcaggccaggtggtagggcagcctctgatggtgaggcagtttctgattggctgcct 160
||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgcctgaggccaggtggt-gggcagcctctgatggtgaggcagtttctgattggctgcct 360
Query: 161 gaggccaggtggtgggcagcctctgatggtgaggcagtttctgattggctgcctgaggcc 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaggccaggtggtgggcagcctctgatggtgaggcagtttctgattggctgcctgaggcc 420
Query: 221 aggtggtgggcagcctctgatggtg 245
|||||||||||||||||||||||||
Sbjct: 421 aggtggtgggcagcctctgatggtg 445
Score = 217 bits (112), Expect = 6e-61
Identities = 118/120 (98%), Gaps = 1/120 (0%)
Strand = Plus / Plus
Query: 101 tgcctcaggccaggtggtagggcagcctctgatggtgaggcagtttctgattggctgcct 160
||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tgcctgaggccaggtggt-gggcagcctctgatggtgaggcagtttctgattggctgcct 414
Query: 161 gaggccaggtggtgggcagcctctgatggtgaggcagtttctgattggctgcctgaggcc 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gaggccaggtggtgggcagcctctgatggtgaggcagtttctgattggctgcctgaggcc 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 5
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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