Query= MSMg01no401_b06.b1 MSMg01no401_b06.b1 CHROMAT_FILE:
MSMg01no401_b06.b1 PHD_FILE: MSMg01no401_b06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:37 2005
(513 letters)
>mm_chr7_69568035_69568947
Length = 913
Score = 946 bits (489), Expect = 0.0
Identities = 504/509 (99%)
Strand = Plus / Minus
Query: 5 gaattccagattacggctgtcctaaaaatcatgggaatcctctcatttccactgtttagc 64
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 gaattccagactagggctgtcctaaaaatcatgggaatcctctcatttccactgtttagc 654
Query: 65 actagaattataggtatgcacaactgtttcagtaattcacccagggccatcagatataga 124
||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 653 actaggattataggtatgcacaactgtttcagtaattcactcagggccatcagatataga 594
Query: 125 ttctacaaacaaaaggaattaatagtcctgttgctgatcaaacatcatacaaatgtaaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ttctacaaacaaaaggaattaatagtcctgttgctgatcaaacatcatacaaatgtaaaa 534
Query: 185 ttaacacttgtgacacaagcaagcatgcctgttagctactggaggacatgaaaccatagg 244
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ttaacacttatgacacaagcaagcatgcctgttagctactggaggacatgaaaccatagg 474
Query: 245 cttatgtagacatttaatccctgtccccagctgcctgtccagtactgctaaaacagtagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 cttatgtagacatttaatccctgtccccagctgcctgtccagtactgctaaaacagtagt 414
Query: 305 tgggaagcacagcagtagtgaaagaacttgctttgggactattgtgttcgttttaactgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tgggaagcacagcagtagtgaaagaacttgctttgggactattgtgttcgttttaactgt 354
Query: 365 ggacatgttgaacgtgtgggggtaggcttagcagccctgcggcttgaaaagaaagacata 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ggacatgttgaacgtgtgggggtaggcttagcagccctgcggcttgaaaagaaagacata 294
Query: 425 acaccagctgctttttctatacagccccaccgtccagtctccagtctctggagctatttg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 acaccagctgctttttctatacagccccaccgtccagtctccagtctctggagctatttg 234
Query: 485 tcaagctgtccacattttccctctcttgt 513
|||||||||||||||||||||||||||||
Sbjct: 233 tcaagctgtccacattttccctctcttgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no401_b06.g1 MSMg01no401_b06.g1 CHROMAT_FILE:
MSMg01no401_b06.g1 PHD_FILE: MSMg01no401_b06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:37 2005
(512 letters)
>mm_chr7_69330108_69331022
Length = 915
Score = 886 bits (458), Expect = 0.0
Identities = 501/516 (97%), Gaps = 5/516 (0%)
Strand = Plus / Plus
Query: 1 caggagtataagggttggagatctgcctatgtgacagagaaagaacaaaagtgagaacag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 caggagtataagggttggagatctgcctatgtgacagagaaagaacaaaagtgagaactg 260
Query: 61 acaaagactctttgaaa-ctattttaaaatagatttatcattggtaaggaactattctta 119
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaaagactctttgaaaactattttaaaatagatttatcattggtaaggaactattctta 320
Query: 120 aggtaggtctagaaataatttactgtggtttctcttttcctggagagacatgaggaaaga 179
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 aagtaggtctagaaataatttactgtggtttctcttttcctggagaaacatgaggaaaga 380
Query: 180 tgtgtttgtcctcgatatgacataggtaacagaacagaaattttaaagggtggccactat 239
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 tgtgtttgtcctagatatgacataggtaacagaacagaaattttaaaaggtggccactat 440
Query: 240 tccaagc-tggtgtaccactgggtttactggggtttacatacagagttgcatgcaatcat 298
||||| | || |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 tccaaacatg-tgtaccactgggtttactggggtttacatacagagttgcatgcaattat 499
Query: 299 gtgtgacacaaaggcaggtaaattaccatgattccaatcagtgtgggaggaatctactaa 358
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtgtgacacaaaggcaagtaaattaccatgattccaatcagtgtgggaggaatctactaa 559
Query: 359 aattgcagccatgtagctctttaaacaaattgaaggaaactcccataaaactctttcaat 418
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 560 aattgcagccatgtagctctttaaacaaattgaaggaaactcccataaaactatttcaat 619
Query: 419 taaaattttctatttgcatagcatgtcttggtgccttgtctcttctttatctgaactgac 478
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 620 taaaattttctatttgcatagcatgtcttgttgccttgtctcttctttatctgaactgac 679
Query: 479 catcccc--gctgacactgtttctatagccccctca 512
||||||| |||||||||||||||||||||||||||
Sbjct: 680 catccccccgctgacactgtttctatagccccctca 715
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 915
Length adjustment: 10
Effective length of query: 502
Effective length of database: 905
Effective search space: 454310
Effective search space used: 454310
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
