Query= MSMg01no404_p11.b1 MSMg01no404_p11.b1 CHROMAT_FILE:
MSMg01no404_p11.b1 PHD_FILE: MSMg01no404_p11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:49 2005
(244 letters)
>mm_chr7_110722503_110723146
Length = 644
Score = 426 bits (220), Expect = e-124
Identities = 232/236 (98%)
Strand = Plus / Plus
Query: 8 caaaggccagatgcaaagctagtccgtagagtgttgctctgcgagtggcaaatgaggggc 67
|||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||
Sbjct: 208 caaaggccagatgcaaagctagtctgtagagtgttgctttgtgagtggcaaatgaggggc 267
Query: 68 ttagttagaaaacggtgagctgagttcctgccttgttaaataatggttgtgtgacctaat 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttagttagaaaacggtgagctgagttcctgccttgttaaataatggttgtgtgacctaat 327
Query: 128 caaggtgctttgcctgttcatatctcatttttataatgtgttgtatataaatcataccag 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 caaggtgctttgcctgttcatatctcatttttataatgtgttgtatataaatcataccag 387
Query: 188 taataatatttatgttagtatgatatatttcatgagctttaaactacaaaatcatg 243
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 taataacatttatgttagtatgatatatttcatgagctttaaactacaaaatcatg 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no404_p11.g1 MSMg01no404_p11.g1 CHROMAT_FILE:
MSMg01no404_p11.g1 PHD_FILE: MSMg01no404_p11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:49 2005
(521 letters)
>mm_chr7_110869486_110870405
Length = 920
Score = 911 bits (471), Expect = 0.0
Identities = 498/507 (98%), Gaps = 1/507 (0%)
Strand = Plus / Minus
Query: 1 agagttcaggtttcttcttcaccataatgttgactacataatagaggaggatggggcatc 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 agagttgaggtttcttcttcaccataatgttgactacataatagaggaggatggggcatc 447
Query: 61 ttatttgcaaagctgtaaaggaatctggtcagaaaggatggtaagcttgggagtccacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttatttgcaaagctgtaaaggaatctggtcagaaaggatggtaagcttgggagtccacaa 387
Query: 121 ttttagcgattcatacacacagtaatgctcaccatacatacagcatatctgggtttattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ttttagcgattcatacacacagtaatgctcaccatacatacagcatatctgggtttattt 327
Query: 181 tcttaggtgttaattaattctcaaaaccttgagtattcattgatatcttcttggacgtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tcttaggtgttaattaattctcaaaaccttgagtattcattgatatcttcttggacgtta 267
Query: 241 atcctcattctgcaggttgtcctatttgatgtcttgacttctattctgaagactaggtcc 300
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atcctca-gctgcaggttgtcctatttgatgtcttgacttctattctgaagactaggtcc 208
Query: 301 attttggaaaggctggattatatagggaagagcagttggccaagggcatgaagctcagga 360
||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 207 attttggaatggctggattttatagggaagagcagttggggaagggcatgaagctcagga 148
Query: 361 gctggtgaagtttatggtagcatgctgggaagagaagtgctgagaagagccaagatgctt 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 147 gctggtgaagtttatggtagcacgctgggaagagaagtgctgagaagagccaagatgctt 88
Query: 421 tgataggtacttgcaatgctggcagatgctgggagaaactagcatctcctttgatatgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 tgataggtacttgcaatgctggcagatgctgggagaaactagcatctcctttgatatgat 28
Query: 481 aataggtcagctagacttttatcctag 507
|||||||||| ||||||||||||||||
Sbjct: 27 aataggtcagttagacttttatcctag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 920
Length adjustment: 10
Effective length of query: 511
Effective length of database: 910
Effective search space: 465010
Effective search space used: 465010
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
