Query= MSMg01no407_p21.b1 MSMg01no407_p21.b1 CHROMAT_FILE:
MSMg01no407_p21.b1 PHD_FILE: MSMg01no407_p21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:49 2005
(358 letters)
>mm_chr7_102236922_102237678
Length = 757
Score = 677 bits (350), Expect = 0.0
Identities = 356/358 (99%), Gaps = 1/358 (0%)
Strand = Plus / Minus
Query: 1 ttaaaggggcatgttaattcattctctaaaatgaaagaaaagcctgtgtgaaaggaccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ttaaaggggcatgttaattcattctctaaaatgaaagaaaagcctgtgtgaaaggaccag 371
Query: 61 agcttttgtgctgcataacccgaagagtctagtctatcaccttgacatccatgtgttgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 agcttttgtgctgcataacccgaagagtctagtctatcaccttgacatccatgtgttgcc 311
Query: 121 atgttttgttctttggggttgtctggaacctgactgagcaacattgacttaaatttgtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 atgttttgttctttggggttgtctggaacctgactgagcaacattgacttaaatttgtta 251
Query: 181 tttcagtctaacattgccctctgagttctagactcatccttttcttctttaaattttaaa 240
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 250 tttcagtctaac-ttgccctctgagttctagactcatccttttcctctttaaattttaaa 192
Query: 241 caacctgaccccacccccagagctcccagggactaaacctccaaccagagtacacatgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 caacctgaccccacccccagagctcccagggactaaacctccaaccagagtacacatgga 132
Query: 301 aagaccatggctccacctgtgtattagcagagaattgcctcatctggcatcagtggaa 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 aagaccatggctccacctgtgtattagcagagaattgcctcatctggcatcagtggaa 74
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 757
Length adjustment: 9
Effective length of query: 349
Effective length of database: 748
Effective search space: 261052
Effective search space used: 261052
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_p21.g1 MSMg01no407_p21.g1 CHROMAT_FILE:
MSMg01no407_p21.g1 PHD_FILE: MSMg01no407_p21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:49 2005
(474 letters)
>mm_chr7_102050889_102051760
Length = 872
Score = 893 bits (462), Expect = 0.0
Identities = 469/472 (99%), Gaps = 2/472 (0%)
Strand = Plus / Plus
Query: 1 tatattttcaaactggaacacttcaaagaataaacttctccctagaaggatcaggcacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatattttcaaactggaacacttcaaagaataaacttctccctagaaggatcaggcacaa 260
Query: 61 cacaggggacttgactgcagaagcccactatgccttgagacaatattcacatgactcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacaggggacttgactgcagaagcccactatgccttgagacaatattcacatgactcaga 320
Query: 121 ttcaacttacttctccttgggtactgttcggatctgcatttccatattgtttttctcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcaacttacttctccttgggtactgttcggatctgcatttccatattgtttttctcttt 380
Query: 181 ctgcatttttctgagctaccattgctgggttccatttttctttccatatgtttttttttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgcatttttctgagctaccattgctgggttccatttttctttccatatgtttttttttt 440
Query: 241 ttccccacagctcataccaatgagtcaaatcttgctctgatccaagaattatatattctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 --ccccacagctcataccaatgagtcaaatcttgctctgatccaagaattatatattctc 498
Query: 301 cttaaaatgactgcattatttgtatttctgacattacctgttatgttctgattttatcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cttaaaatgactgcattatttgtatttctgacattacctgttatgttctgattttatcag 558
Query: 361 taaattattcagacctttgtaagcacacaggtattattacttagccagtgattaattcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 taaattattcagacctttgtaagcacacaggtattattacttagccagtgattaattcta 618
Query: 421 tgcctcctgtttgattgcacatgagcgtttgtgtgtgtgtgtgtgtgtgtgt 472
|||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 619 tgcctcctgtttgattgcacatgagcgtttgtgtgtgtgtgtgtatgtgtgt 670
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 872
Length adjustment: 10
Effective length of query: 464
Effective length of database: 862
Effective search space: 399968
Effective search space used: 399968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
