Query= MSMg01no409_c05.b1 MSMg01no409_c05.b1 CHROMAT_FILE:
MSMg01no409_c05.b1 PHD_FILE: MSMg01no409_c05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:23 2005
(371 letters)
>mm_chr7_116219629_116220399
Length = 771
Score = 658 bits (340), Expect = 0.0
Identities = 364/372 (97%), Gaps = 1/372 (0%)
Strand = Plus / Plus
Query: 1 taaaaaatacctaagtagctgaagtgccaggacaaatttaaacagcaaaattacaacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 taaaaaatacctaagtagctgaagtgccaggacaaatttaaacagcaaaattacaacaga 259
Query: 61 aaaaaaaaaa-ctgccaagtcctatatttggttccaaaatgccaagtgaacagtacaaaa 119
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaaaaaaaaaactgccaagtcctatatttggttccaaaatgccaagtgaacagtacaaaa 319
Query: 120 tggacaagacctcggtgagtgttacaagacgtgaacaacctggagttttaaaacaccaca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tggacaagacctcggtgagtgttacaagacgtgaacaacctggagttttaaaacaccaca 379
Query: 180 gcaaagtctttggtgagactgccaaagacttacagcaagctcagtccttgtgtttaagaa 239
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gcaaagtcagcggtgagactgccaaagacttacagcaagctcagtccttgtgtttaagaa 439
Query: 240 ggaaaatgaaggtatttgatcgtttctgcgcaggctgtttagacctgctactatctgcag 299
|||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggaaaatgaaggtaggtgattgtttctgcgcaggctgtttagacctgctactatctgcag 499
Query: 300 ttctagaagcccgttgcaatgcagcctgggttcggccatctccacctacattatatgagg 359
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttctagaagccagttgcaatgcagcctgggttcggccatctccacctacattatatgagg 559
Query: 360 agtggatagggg 371
||||||||||||
Sbjct: 560 agtggatagggg 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no409_c05.g1 MSMg01no409_c05.g1 CHROMAT_FILE:
MSMg01no409_c05.g1 PHD_FILE: MSMg01no409_c05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:23 2005
(249 letters)
>mm_chr7_116380668_116381316
Length = 649
Score = 472 bits (244), Expect = e-138
Identities = 247/248 (99%)
Strand = Plus / Minus
Query: 1 aatccccagcaaggcaaaaagaatgtgtctggaccatattatgatttgaataccaagtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 aatccccagcaaggcaaaaagaatgtgtctggaccatattatgatttgaataccaagtaa 389
Query: 61 ctctccagaggctcctgtattgaaggctgggtcgcccatgcaagcagtgctgtgaggtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctctccagaggctcctgtattgaaggctgggtcgcccatgcaagcagtgctgtgaggtga 329
Query: 121 agcctttggggcataatctctgagttcatcagtggatcagtcccttgacatgtcccatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 agcctttggggcataatctctgagttcatcagtggatcagtcccttgacatgtcccatca 269
Query: 181 atgtcttcatgacatgatggagttcttgggtggtatagaaagtaggaagtgggaccttct 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atgccttcatgacatgatggagttcttgggtggtatagaaagtaggaagtgggaccttct 209
Query: 241 tgtaggaa 248
||||||||
Sbjct: 208 tgtaggaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
