Query= MSMg01no410_j06.b1 MSMg01no410_j06.b1 CHROMAT_FILE:
MSMg01no410_j06.b1 PHD_FILE: MSMg01no410_j06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:21 2005
(247 letters)
>mm_chr7_150401757_150402404
Length = 648
Score = 418 bits (216), Expect = e-121
Identities = 236/248 (95%), Gaps = 10/248 (4%)
Strand = Plus / Minus
Query: 1 gtctgtactctc-aaaaaagaccagaagtactctccttatctacactgctgattgtgaga 59
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gtctgtactctcaaaaaaagaccagaagtactctccttatctacactgctgattgtgaga 294
Query: 60 cactgtacagacaagatggtaaaacaaaggacagttgtaaagagtccaaatgttgaatgg 119
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 cactatacagacaagatggtaaaacaaaggacagttgtaaagagtccaaatgttgaatgg 234
Query: 120 aaatcctaaggcaaagccctttcaggaaaatttggaaaatttaccagcttgagatactta 179
|||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 233 aaatcctaaggcaaagccctttca---------ggaaaatttaccagcttgagatactta 183
Query: 180 atacaaggcctctgactaatggtggcttaagctgatcaattaaagcatgctttaaaaaca 239
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aaacaaggcctctgactaatggtggcttaagctgatcaattaaagcatgctttaaaaaca 123
Query: 240 aagacagt 247
||||||||
Sbjct: 122 aagacagt 115
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 648
Length adjustment: 9
Effective length of query: 238
Effective length of database: 639
Effective search space: 152082
Effective search space used: 152082
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no410_j06.g1 MSMg01no410_j06.g1 CHROMAT_FILE:
MSMg01no410_j06.g1 PHD_FILE: MSMg01no410_j06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:21 2005
(205 letters)
>mm_chr7_150197435_150198039
Length = 605
Score = 397 bits (205), Expect = e-115
Identities = 205/205 (100%)
Strand = Plus / Plus
Query: 1 agtgcccatgtgagccctgttgagatacctggaggtagcctgggtcaagacatcttgagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgcccatgtgagccctgttgagatacctggaggtagcctgggtcaagacatcttgagt 260
Query: 61 ttgaactcaagggtagaaggacagacgtgagcatgtcttttatcctccccagacctctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgaactcaagggtagaaggacagacgtgagcatgtcttttatcctccccagacctctgt 320
Query: 121 gtctgcttctgtgaagagagtagaaggccctgctggagggctactgcattatatagatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtctgcttctgtgaagagagtagaaggccctgctggagggctactgcattatatagatga 380
Query: 181 gccagcggggtgggggtggggggat 205
|||||||||||||||||||||||||
Sbjct: 381 gccagcggggtgggggtggggggat 405
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 205
Length of database: 605
Length adjustment: 8
Effective length of query: 197
Effective length of database: 597
Effective search space: 117609
Effective search space used: 117609
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
