Query= MSMg01no413_c09.b1 MSMg01no413_c09.b1 CHROMAT_FILE:
MSMg01no413_c09.b1 PHD_FILE: MSMg01no413_c09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:44 2005
(184 letters)
>mm_chr7_119918263_119918846
Length = 584
Score = 340 bits (176), Expect = 2e-98
Identities = 182/184 (98%)
Strand = Plus / Minus
Query: 1 aaagctgcccactgaaacctgttcctctttgctgcctaccattctctgcaaatgacaact 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 384 aaagctgcccactgaaacctgttcctctttgctgcctaccattctctgcaaatgacaagt 325
Query: 61 ggccatggggatgaacagtcgccatcctaccacccctgcactgtatgcgcaaacacctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggccatggggatgaacagtcgccatcctaccacccctgcactgtatgcgcaaacacctag 265
Query: 121 tctctgatataagacctaaagacccattcctaccctatatcctgtctttgtcactccctt 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 264 tctctgatataagacctaaagacccattcctaccctacatcctgtctttgtcactccctt 205
Query: 181 aacc 184
||||
Sbjct: 204 aacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 584
Length adjustment: 8
Effective length of query: 176
Effective length of database: 576
Effective search space: 101376
Effective search space used: 101376
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no413_c09.g1 MSMg01no413_c09.g1 CHROMAT_FILE:
MSMg01no413_c09.g1 PHD_FILE: MSMg01no413_c09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:44 2005
(249 letters)
>mm_chr7_119718648_119719296
Length = 649
Score = 400 bits (207), Expect = e-116
Identities = 237/249 (95%), Gaps = 5/249 (2%)
Strand = Plus / Plus
Query: 1 ttctttcttcttttcttccagggccctttccggaaggcatggtgagtgtcgcgagcttgt 60
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 ttctttcttcttttcttccagggccctttccggaaggcatggtgagtgtcatgagcttgt 260
Query: 61 ctggcttctgtggcctcggtgaagctacttgtttctgttgtctaatgtgtctctgtccca 120
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctagcttctgtggtctcggtgaagctacttgtttctgttgtctaatgtgtctctgtccca 320
Query: 121 gcttgggacacactggctaggtggggagggacagcttagtgacatgaagaacactcactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttgggacacactggctaggtggggagggacagcttagtgacatgaagaacactcactc 380
Query: 181 atcttcacagatctggccccagtagggcagacttaccctgtgcctggcatggaagtttag 240
||| ||||| |||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 381 atcagcacaggtctggccccagtagggcagacttaccctgtgcctgg--t---agtttag 435
Query: 241 gaagagata 249
|||||||||
Sbjct: 436 gaagagata 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
