Query= MSMg01no413_h15.b1 MSMg01no413_h15.b1 CHROMAT_FILE:
MSMg01no413_h15.b1 PHD_FILE: MSMg01no413_h15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:10 2005
(566 letters)
>mm_chr7_125789995_125790963
Length = 969
Score = 1065 bits (551), Expect = 0.0
Identities = 564/571 (98%), Gaps = 7/571 (1%)
Strand = Plus / Plus
Query: 1 aaaggccttgtatccaaatgcagtcatatactcatgtcccagagcttacagctttcatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaggccttgtatccaaatgcagtcatatactcatgtcccagagcttacagctttcatat 260
Query: 61 ctgaatttgtgggactcacagttcaactcatgtaatctccctgacagcatcattgttcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgaatttgtgggactcacagttcaactcatgtaatctccctgacagcatcattgttcaa 320
Query: 121 agaaaaaaaaatgagacttcattgaaacttatcaaactagaacacattctttcagctgtc 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaaaaaaa-tgagacttcattgaaacttatcaaactagaacacattctttcagctgtc 379
Query: 181 acccagtgcaacgcatcatgggagggcagtgttgctttcattccacattgacaatgtgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acccagtgcaacgcatcatgggagggcagtgttgctttcattccacattgacaatgtgcc 439
Query: 241 cagctgtatgccaatggacttctggtctgagaactccatgatctcacaacagaagctaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cagctgtatgccaatggacttctggtctgagaactccatgatctcacaacagaagctaat 499
Query: 301 gaatgcctcctgcttctgtagttttctgactgatgtccccccctccctccaggattcctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gaatgcctcctgcttctgtagttttctgactgatgtccccccctccctccaggattcctg 559
Query: 361 tttcctgattcctagaacccatgggcatcttgccatcatccctacaataccaata----- 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tttcctgattcctagaacccatgggcatcttgccatcatccctacaataccaatacaata 619
Query: 416 tccagagggggggggagtgagcaagcttgcatgtgcgggtacacacaaaaacatgtagaa 475
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tccagagggggggg-agtgagcaagcttgcatgtgcgggtacacacaaaaacatgtagaa 678
Query: 476 aacagagaacaactctgggtctcttcttagacgttgtccacctcctctgagataggattt 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aacagagaacaactctgggtctcttcttagacgttgtccacctcctctgagataggattt 738
Query: 536 cccactagcctacagctagactggctggctg 566
|||||||||||||||||||||||||||||||
Sbjct: 739 cccactagcctacagctagactggctggctg 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 969
Length adjustment: 10
Effective length of query: 556
Effective length of database: 959
Effective search space: 533204
Effective search space used: 533204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_h15.g1 MSMg01no413_h15.g1 CHROMAT_FILE:
MSMg01no413_h15.g1 PHD_FILE: MSMg01no413_h15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:10 2005
(507 letters)
>mm_chr7_125978295_125979201
Length = 907
Score = 571 bits (295), Expect = e-167
Identities = 315/325 (96%), Gaps = 6/325 (1%)
Strand = Plus / Minus
Query: 183 aagggggcagaaataggtggatcaccagagctctctggccggcagccagccaagacaact 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 aagggggcagaaataggtggatcaccagagctctctggccggcagccagccaagacaact 848
Query: 243 ggtgagctccagtctcatagagagcctctgtcacaaaaacaactggacagtagaaagaca 302
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 ggtgagctccaggctcagagagagcctctgtcacaaaaacaactggacagtagaaagaca 788
Query: 303 cttgacatcaatttctgtcctccacacacatatgtacacactcagacacagacagacaga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 cttgacatcaatttctgtcctccacacacatatgtacacactcagacacagacagacaga 728
Query: 363 cagacagacagatagacacacacacacatgtatcaaaagtacactgagtggagcccctcc 422
|||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 727 cagacagacagacagacacaca------tgtatcaaaagtacactgagtggagcccctcc 674
Query: 423 ctacacacagcagggtcatgtagctatgggaagctcctaatttatagtctcccaggaact 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ctacacacagcagggtcatgtagctatgggaagctcctaatttatagtctcccaggaact 614
Query: 483 aacttttagaactatactcctttgt 507
|||||||| ||||||||||||||||
Sbjct: 613 aacttttaaaactatactcctttgt 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
