Query= MSMg01no415_c10.b1 MSMg01no415_c10.b1 CHROMAT_FILE:
MSMg01no415_c10.b1 PHD_FILE: MSMg01no415_c10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:26 2005
(437 letters)
>mm_chr7_144480198_144481034
Length = 837
Score = 791 bits (409), Expect = 0.0
Identities = 430/437 (98%)
Strand = Plus / Plus
Query: 1 ccaatgaaatattctaggactttctggactaccctggaacaaacactccagaacgttcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaatgaaatattctaggactttctggactaccctggaacaaacactccagaacgttcta 260
Query: 61 gatcagcagggcccactttgtgcctggtgataatctaaccaaataaacaggctgacattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatcagcagggcccactttgtgcctggtgataatctaaccaaataaacaggctgacattt 320
Query: 121 tagggtaagcatgtcccagtgtcctgaataaaacattaaacatacttatccgaaaatgtt 180
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 321 tagggtaagcatgtcccagtgtcctgaatgaaacattaaacatacttatctgaaaatgtt 380
Query: 181 agccataagcttacagctgtaagccatatatctgacaagctcccattaacagggacctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agccataagcttacagctgtaagccatatatctgacaagctcccattaacagggacctct 440
Query: 241 ctgtattttccacagctcctcatcctatctgtgtggcccagccctccgagggattggcct 300
||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 ctgaaggttccacagctcctcatcctatctgtgtggcccagccctccaagggattggcct 500
Query: 301 cacaacttggctcctctcaatgagtgaggctgagaatgctgcctgagtaaggtgtggaac 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 cacaacttggctcctctcaatgagtgaggctgagaatgctgcctgagtaaggtgtggagc 560
Query: 361 tgacaggtgtcagtcagtgatgtttctggaccagagctactcatccggaaggccaccctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgacaggtgtcagtcagtgatgtttctggaccagagctactcatccggaaggccaccctt 620
Query: 421 cctaagcacaaccctgt 437
|||||||||||||||||
Sbjct: 621 cctaagcacaaccctgt 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_c10.g1 MSMg01no415_c10.g1 CHROMAT_FILE:
MSMg01no415_c10.g1 PHD_FILE: MSMg01no415_c10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:26 2005
(392 letters)
>mm_chr7_144671740_144672531
Length = 792
Score = 646 bits (334), Expect = 0.0
Identities = 376/390 (96%), Gaps = 2/390 (0%)
Strand = Plus / Minus
Query: 4 gggagggaggaaatgagaagagctctccccaggattcctgcacctgggactccgtctccc 63
||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||
Sbjct: 592 gggagggaggaaatgagaagagctctccccaggatccctggacctgggactctgtctccc 533
Query: 64 acagacactggggtgaatccctccagtgaggcttatgtggaaattaaccaaacttatagc 123
||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 532 acagatactggggtgaattcctccagtgagacttatgtggaaattaaccaaacttatagc 473
Query: 124 tttggcagatcacttgagtttaggagcaaaactagtttgccaaaatgattcttttctctt 183
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tttgacagatcacttgagtttaggagcaaaactagtttgccaaaatgattcttttctctt 413
Query: 184 taattaaaaccctttgttaactgccaagctgccgccttcttccaagacagactgtgat-a 242
||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||| |
Sbjct: 412 taattaaaaccctttgttaactgccaagctgccaccttcttccaagacagacag-gatta 354
Query: 243 gtttatatccatcaccccgggcagacggccatccaaagagactagggtgtgtcccaagag 302
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gcttatatccatcaccccgggcagacggccatccaaagagactagggtgtgtcccaagag 294
Query: 303 agcagagacggcgccgtacaaatgactctgtaggcacaggttcaagcatctggcagatca 362
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 293 agcagagacggcgccgtacaaatgactctgtcgacacaggttcaagcatctggcagatca 234
Query: 363 gatgaaaaggtttctacagggcccctggcg 392
||||||||||||||||||||||||||||||
Sbjct: 233 gatgaaaaggtttctacagggcccctggcg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
