Query= MSMg01no416_b14.b1 MSMg01no416_b14.b1 CHROMAT_FILE:
MSMg01no416_b14.b1 PHD_FILE: MSMg01no416_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:39 2005
(248 letters)
>mm_chr7_86377874_86378521
Length = 648
Score = 464 bits (240), Expect = e-135
Identities = 246/248 (99%)
Strand = Plus / Minus
Query: 1 tactgtccttggggtttggttcagcttggttgggtggcggagatactgcagcccacagac 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 448 tactgtccttggggtttggttcagcttggttgggtggcagagatactgcagcccacagac 389
Query: 61 aaactccatcaactcagccctctgtgctcagcacctcctcatccctggcttttccacttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aaactccatcaactcagccctctgtgctcagcacctcctcatccctggcttttccacttt 329
Query: 121 gacctgataagtcagaaaccctggggtcagagatagtgctctccagaggactagccaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gacctgataagtcagaaaccctggggtcagagatagtgctctccagaggactagccaggt 269
Query: 181 ttatactttatctaaaagagaagcgatacctgtctgagaggacctgcccttagtgagccc 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttagactttatctaaaagagaagcgatacctgtctgagaggacctgcccttagtgagccc 209
Query: 241 cgaatcct 248
||||||||
Sbjct: 208 cgaatcct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no416_b14.g1 MSMg01no416_b14.g1 CHROMAT_FILE:
MSMg01no416_b14.g1 PHD_FILE: MSMg01no416_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:39 2005
(480 letters)
>mm_chr7_86194069_86194948
Length = 880
Score = 874 bits (452), Expect = 0.0
Identities = 473/480 (98%), Gaps = 1/480 (0%)
Strand = Plus / Plus
Query: 1 tcagtggctcagacccacacttagcaaggcagaagcaagtattccatggtgacactgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagtggctcagacccacacttagcaaggcagaagcaagtattccatggtgacactgttc 260
Query: 61 agtgccctgggagattgcttgtattctaagggtcaatgaagaacacaggagagccaccaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgtgccctgggagattgcttgtattctaagggtcaatgaagaacacaggagagccaccaa 320
Query: 121 cagtggcctccagcaatctttatctcccatgacactattgcctacactagttcagggatg 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 cagtggcctccagcaatctttatctcc-atgacactattgcctacactagttcagggatg 379
Query: 181 gcctttgggacaaatccaataacagtggcagtgacatgtgtgactcccaaatctaaaaag 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gcctttgggaccaatccaataacagtggcagtgacatgtgtgactcccaaatctaaaaag 439
Query: 241 caaccagaagtattccattcctgtctggcctctacctcgttcaccatggtgggagtcagc 300
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaaccacaagtattccattcctgtctggcctctacctcgttcaccatggtgggagtcagc 499
Query: 301 caccgtgtcatgagaacactcagcaactacaaaaaggagacccctatggagaagagctgt 360
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 caccgtgccatgaggacactcagcaactacaaaaaggagacccctatggagaagagctgt 559
Query: 361 ggctgctaaccaacagccagccccaacctgccaattgcatgagccagccacctaagctgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggctgctaaccaacagccagccccaacctgccaattgcatgagccagccacctaagctgt 619
Query: 421 ggatccccgaggctcgggaaagccatcagctcactgcatttgtactggcatccaagtgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggatccccgaggctcgggaaagccatcagctcactgcatttgtactggcatccaagtgta 679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
