Query= MSMg01no416_b22.b1 MSMg01no416_b22.b1 CHROMAT_FILE:
MSMg01no416_b22.b1 PHD_FILE: MSMg01no416_b22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:40 2005
(528 letters)
>mm_chr7_109235109_109236035
Length = 927
Score = 930 bits (481), Expect = 0.0
Identities = 508/517 (98%), Gaps = 1/517 (0%)
Strand = Plus / Minus
Query: 12 gaattccaagactcttcacaacccaagttcttgaagtcatgcgggagtgggtagaacttg 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 gaattccaagactcttcacaacccaagttcttgaagtcatgcgggagtgggtagaacttg 668
Query: 72 gggtcttagtcccagaattctcagtgctccctgcctgcctcagtaggtatatgtaataga 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gggtcttagtcccagaattctcagtgctccctgcctgcctcagtaggtatatgtaataga 608
Query: 132 agtctggacaaaggatcttgaggagggaaggggcatgcaatatgggtctcctgtcatgag 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 agtctggacaaaggatcttgaggagggaaggggcatgcaatatgggtctcctgtcatgag 548
Query: 192 taccaggtcagtgaagatggcacacaggagagctttggtagcatgctttgtgggtcaggc 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 taccaggtcagtgaagatggcacacaggagagctttggtagcatgctttgtgggtcaggc 488
Query: 252 tatctgtatggggttgagaataaagagtcaggggctgtgggaggctggacagagatcctg 311
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tatctgtatggggttgagagtaaagagtcaggggctgtgggaggctggacagagatcctg 428
Query: 312 tctttagcttgtctgttgggtaagtcatctaatgagacagggaagaaaaaaaaatcacca 371
|||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||
Sbjct: 427 tctttagcttgtctgttgggtaaggcatctaatgagacagaaaagaaaaaaaa-tcacca 369
Query: 372 ggcatttaactccttattatacagagtcaggtgttgtagtctaaaagcagaagtctgggc 431
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 368 ggcatttaactccttattatatagagtcaggtgttgtagtctaaaagcataagtctgggc 309
Query: 432 caaagttattcattaggctagaggcaaagctaagcctgtgtgagtcctgaatgtgggatc 491
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 308 caaagttattcattaggctagaggcaaagctaagcctgtgtgagacctgagtgtgggatc 249
Query: 492 ctggtggtgactagctttccaaggaccgttagtgctc 528
|||||||||||||||||||||||||||||||||||||
Sbjct: 248 ctggtggtgactagctttccaaggaccgttagtgctc 212
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 927
Length adjustment: 10
Effective length of query: 518
Effective length of database: 917
Effective search space: 475006
Effective search space used: 475006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no416_b22.g1 MSMg01no416_b22.g1 CHROMAT_FILE:
MSMg01no416_b22.g1 PHD_FILE: MSMg01no416_b22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:40 2005
(468 letters)
>mm_chr7_109085796_109086663
Length = 868
Score = 905 bits (468), Expect = 0.0
Identities = 468/468 (100%)
Strand = Plus / Plus
Query: 1 ctattgcccttggacccagggtttctttgaagagacttcaccttcaggcttcagcaagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctattgcccttggacccagggtttctttgaagagacttcaccttcaggcttcagcaagac 260
Query: 61 agaacgttgagctccactatctacaaagaggctggtgggttcccctgggctggggagggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaacgttgagctccactatctacaaagaggctggtgggttcccctgggctggggagggg 320
Query: 121 gtcttaaccccatccccctactcttcctctctgtttccatcctctaagaccatggtttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcttaaccccatccccctactcttcctctctgtttccatcctctaagaccatggtttga 380
Query: 181 ataggcttctttttcttggggcattccctggcccagtggccccgtggcccttacaataag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataggcttctttttcttggggcattccctggcccagtggccccgtggcccttacaataag 440
Query: 241 cccattggttcttacctccttctctggaagccatctgtttcaggcttctcctacagcctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccattggttcttacctccttctctggaagccatctgtttcaggcttctcctacagcctt 500
Query: 301 ctggtggctatggttgccaacaggatctttgccaggttgagagtctgttgcttctgctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctggtggctatggttgccaacaggatctttgccaggttgagagtctgttgcttctgctct 560
Query: 361 ttcacctgtcgttcctccatttgtttttctgcttttatctgttcctctgtaccctccctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcacctgtcgttcctccatttgtttttctgcttttatctgttcctctgtaccctccctt 620
Query: 421 ccattagacgcgttctctgagtaagtctctcagacctttttctcctaa 468
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccattagacgcgttctctgagtaagtctctcagacctttttctcctaa 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
