Query= MSMg01no417_g01.b1 MSMg01no417_g01.b1 CHROMAT_FILE:
MSMg01no417_g01.b1 PHD_FILE: MSMg01no417_g01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:14 2005
(518 letters)
>mm_chr7_65070130_65071047
Length = 918
Score = 795 bits (411), Expect = 0.0
Identities = 455/487 (93%), Gaps = 27/487 (5%)
Strand = Plus / Minus
Query: 32 caccacgaagctcctctgaaagtattttgctgagttctctacatagttctgtatagatga 91
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 caccaagaagctcctctgaaagtattttgctgagttctctacatagttctgtatagatga 859
Query: 92 tgtgtgtctgtgtagggaaattggctatagtccttaaagaccacaagaacagcatatttt 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 tgtgtgtctgtgtagggaaattggctatagtccttaaagaccacaagaacagcatatttt 799
Query: 152 gtaaccttaccttccacagcaggagatagagttccttatatgcagagattataaattaag 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 gtaaccttaccttccacagcaggagatagagttccttatatgcagagattataaattaag 739
Query: 212 tgatttgaggccacagtgaccacagggtatgctgggtagagacatgacacagggcttggt 271
|||||||||||||||||||| |||||||||||||
Sbjct: 738 tgatttgaggccacagtgac---------------------------cacagggcttggt 706
Query: 272 gaacagagagaggtaaggtgtgtttgggtcaccaagtagtaagtgtcacagcaaaaacaa 331
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 705 gaacagagagaggtaagttgtgtttgggtcaccaagtactaagtgtcacagcaaaaacaa 646
Query: 332 gcttagaaccctcctgagcctgttctgttgaaatgaaagatatttgaaggacgtgcccag 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gcttagaaccctcctgagcctgttctgttgaaatgaaagatatttgaaggacgtgcccag 586
Query: 392 ctgtaaaggtcaggcttttccatgaattcaaccaacatccttgaatgtgggcaaaacagt 451
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 ctctaaaggtcaggcttttccatgaattcaaccaacatccttgaatgtgggcaaaacagt 526
Query: 452 tcccttgcattcctatgtcaggatttactcccctaagacgtcagtcactcaaaaggaaga 511
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tcccttgcattcctatgttaggatttactcccctaagacgtcagtcactcaaaaggaaga 466
Query: 512 gactggc 518
|||||||
Sbjct: 465 gactggc 459
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no417_g01.g1 MSMg01no417_g01.g1 CHROMAT_FILE:
MSMg01no417_g01.g1 PHD_FILE: MSMg01no417_g01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:14 2005
(547 letters)
>mm_chr7_64907749_64908695
Length = 947
Score = 1035 bits (535), Expect = 0.0
Identities = 544/547 (99%)
Strand = Plus / Plus
Query: 1 agcacagcctattaggaatccccttcccccgctccaccctccacagcatgatctcttcct 60
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 agcatagcctattaggaatccccttcccctgctccaccctccacagcatgatctcttcct 260
Query: 61 ctttagggcattcacatgtactttttgctctctttaaaaacattctgacaagagtcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttagggcattcacatgtactttttgctctctttaaaaacattctgacaagagtcttct 320
Query: 121 ttgtagaactcatcagtttggagtttttgctaacatcttttcccagtaggatacataagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtagaactcatcagtttggagtttttgctaacatcttttcccagtaggatacataagc 380
Query: 181 agcatttactcccacctgtaattcaaatgataaattaagttatgatttcaccaaagctta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcatttactcccacctgtaattcaaatgataaattaagttatgatttcaccaaagctta 440
Query: 241 ctctggggaatctggggaaccaatacgtttattaggtttacttacagaacaatagatgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctctggggaatctggggaaccaatacgtttattaggtttacttacagaacaatagatgag 500
Query: 301 ggcttacgggcaggaagatgggtgaccttaacacagcagccctactggattatatgcatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggcttacgggcaggaagatgggtgaccttaacacagcagccctactggattatatgcatg 560
Query: 361 tagcatggatgacaattcccccagggaccccttgccctagtccttctgctataatctatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagcatggatgacaattcccccagggaccccttgccctagtccttctgctataatctatt 620
Query: 421 tttcctgcctatactctagttcttcccaaagaacattgagtccaagtgcagttaaggcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttcctgcctatactctagttcttcccaaagaacattgagtccaagtgcagttaaggcag 680
Query: 481 aattgtatataatcaattggaaaaggtaaggctggatactcagggggtctcatgactctc 540
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 681 aattgtatataatcaattggaaaaggtagggctggatactcagggggtctcatgactctc 740
Query: 541 cctgcct 547
|||||||
Sbjct: 741 cctgcct 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
