Query= MSMg01no419_a03.b1 MSMg01no419_a03.b1 CHROMAT_FILE:
MSMg01no419_a03.b1 PHD_FILE: MSMg01no419_a03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:22 2005
(421 letters)
>mm_chr7_26489817_26490643
Length = 827
Score = 750 bits (388), Expect = 0.0
Identities = 415/432 (96%), Gaps = 16/432 (3%)
Strand = Plus / Minus
Query: 1 caggctctcccggattgcctccgtggatgctcagaggtataaagcactgtgaacggcgcc 60
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 528 caggctctcccggattgcct-cgtggatgctcagaggtataaagcactgtgaacggtgcc 470
Query: 61 taaagagatgatacctgagtctaatagggttttccctgggcctcagcgtcgccccctgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 taaagagatgatacctgagtctaatagggttttccctgggcctcagcgtcgccccctgga 410
Query: 121 attctgggatcaaagccggcgttccttagggagtgctggaggcgattgcacagaaaggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 attctgggatcaaagccggcgttccttagggagtgctggaggcgattgcacagaaaggga 350
Query: 181 caagatgtggtaggggcgtcagctaagagggaga-------cggcggccaatgacacgga 233
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 349 caagatgtggtaggggcgtcagctaagagggagacgcaatccggcggccaatgacacgga 290
Query: 234 gaccaccagtcctctgttttt----tttaatgggccccccaggtgggcttgagggggggt 289
|||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 289 gaccaccagtcctctg----tcacctttaatgggccccccaggtgggcttgagggggggt 234
Query: 290 gcaggtgtccttaaatacagccccgggcgctgcgggcggggcgggggcggggccgggcct 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gcaggtgtccttaaatacagccccgggcgctgcgggcggggcgggggcggggccgggcct 174
Query: 350 gccgggaggggcggggcggggcggggcttcagctgcacttgcaggagcgcacaatcatgt 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 gccgggaggggcggggcggggcggggcttcagctgcacttgcaggagcgcacaatcatgt 114
Query: 410 tggacaactgct 421
||||||||||||
Sbjct: 113 tggacaactgct 102
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 827
Length adjustment: 9
Effective length of query: 412
Effective length of database: 818
Effective search space: 337016
Effective search space used: 337016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no419_a03.g1 MSMg01no419_a03.g1 CHROMAT_FILE:
MSMg01no419_a03.g1 PHD_FILE: MSMg01no419_a03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:22 2005
(231 letters)
>mm_chr7_26249538_26250166
Length = 629
Score = 400 bits (207), Expect = e-116
Identities = 223/231 (96%), Gaps = 6/231 (2%)
Strand = Plus / Plus
Query: 1 tagttcaaaggttgccaagactgcatggtgagatcctgtctcaacaaa----gaaatcaa 56
||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 197 tagttcaaaggttgccaaggctgcatggtgagatcctgtctcaacaaacaaagaaatcaa 256
Query: 57 aacaatacagatatcccaagtttcctcagagacattttgtagcacaaacagccagcaaaa 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aacaatacagatatcccaagtttcctcagagacattttgtagcacaaacagccagcaaaa 316
Query: 117 gtggcagtgctcaccttgttaggagagttgtcagaaggagccagatctaggggaggaaga 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gtggcagtgctcaccttgttaggagagttgtcagaaggagccagatctaggggaggaaga 376
Query: 177 gagagttatcagtgcacatgaataaggctttgtgatttctagcaggtggag 227
||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aaga--tatcagtgcacatgaataaggctttgtgatttctagcaggtggag 425
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 629
Length adjustment: 9
Effective length of query: 222
Effective length of database: 620
Effective search space: 137640
Effective search space used: 137640
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
