MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-419H04
Chromosome	7 (Build37)
Map Location	137,545,697 - 137,546,074
singlet/doublet	singlet
Overlap gene	Ate1
Upstream gene	Brwd2, LOC100043150, Fgfr2, LOC546005
Downstream gene	LOC100043163, Nsmce4a, Tacc2, LOC619876, Btbd16, EG434249, Plekha1, Htra1, Dmbt1, 4933402N03Rik, 5430419D17Rik, LOC546006, LOC100043173, Cuzd1, 1700007K09Rik, 1700063I17Rik, 2310057M21Rik, Pstk, Ikzf5
Link	Open Mouse BAC browser

Click to get alignment info.

name	Brwd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207425 MGI:1920230
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043150 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043150
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Fgfr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14183 MGI:95523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC546005 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546005
definition	note : ring finger and WD repeat domain 3 pseudogene pseudo : _no_value

name	Ate1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11907 MGI:1333870
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100043163 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043163
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Nsmce4a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67872 MGI:1915122
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 154 ESTs, 4 Proteins

name	Tacc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57752 MGI:1928899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC619876 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619876
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	Btbd16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330660 MGI:3045247
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG434249 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434249 MGI:3645136
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	Plekha1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101476 MGI:2442213
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Htra1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56213 MGI:1929076
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dmbt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12945 MGI:106210
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933402N03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233918 MGI:1914681
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5430419D17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71395 MGI:1918645
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC546006 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546006
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC100043173 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043173
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 1 Protein

name	Cuzd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16433 MGI:1202881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700007K09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69318 MGI:1916568
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700063I17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68223 MGI:1915473
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310057M21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68277 MGI:1915527
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pstk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214580 MGI:2685945
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ikzf5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67143 MGI:1914393
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Brwd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368235 GeneID:207425 MGI:1920230
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bromodomain and WD repeat domain containing 2 transcript_id : NM_172255.2

name	LOC100043150 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257721 GeneID:100043150
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100043150 transcript_id : XM_001479643.1

name	Fgfr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116089354 GeneID:14183 MGI:95523
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibroblast growth factor receptor 2 transcript_id : NM_201601.2

name	Fgfr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116089348 GeneID:14183 MGI:95523
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibroblast growth factor receptor 2 transcript_id : NM_010207.2

name	Ate1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542150 GeneID:11907 MGI:1333870
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arginine-tRNA-protein transferase 1 transcript_id : NM_013799.2

name	Ate1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131185 GeneID:11907 MGI:1333870
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arginine-tRNA-protein transferase 1 transcript_id : NM_001029895.2

name	LOC100043163 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257724 GeneID:100043163
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043163 transcript_id : XM_001479657.1

name	Nsmce4a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257808 GeneID:67872 MGI:1915122
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 154 ESTs, 4 Proteins product : non-SMC element 4 homolog A (S. cerevisiae), transcript variant 1 transcript_id : XM_133876.7

name	Tacc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109148526 GeneID:57752 MGI:1928899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transforming, acidic coiled-coil containing protein 2 transcript_id : NM_206856.3

name	Tacc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:59624975 GeneID:57752 MGI:1928899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transforming, acidic coiled-coil containing protein 2 transcript_id : NM_001004468.2

name	Tacc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109148527 GeneID:57752 MGI:1928899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transforming, acidic coiled-coil containing protein 2 transcript_id : NM_021314.4

name	Btbd16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486657 GeneID:330660 MGI:3045247
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BTB (POZ) domain containing 16 transcript_id : NM_001081038.1

name	EG434249 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94381064 GeneID:434249 MGI:3645136
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : predicted gene, EG434249 transcript_id : XM_489208.3

name	Plekha1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129896 GeneID:101476 MGI:2442213
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 transcript_id : NM_133942.2

name	Htra1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363255 GeneID:56213 MGI:1929076
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HtrA serine peptidase 1 transcript_id : NM_019564.2

name	Dmbt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87239966 GeneID:12945 MGI:106210
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : deleted in malignant brain tumors 1 transcript_id : NM_007769.2

name	4933402N03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383049 GeneID:233918 MGI:1914681
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933402N03 gene transcript_id : NM_173409.3

name	5430419D17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116089315 GeneID:71395 MGI:1918645
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5430419D17 gene transcript_id : NM_175166.3

name	LOC546006 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257726 GeneID:546006
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to deleted in malignant brain tumors 1 transcript_id : XM_620573.4

name	LOC100043173 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257728 GeneID:100043173
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 1 Protein product : similar to hCG2040007 transcript_id : XM_001479673.1

name	Cuzd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778950 GeneID:16433 MGI:1202881
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CUB and zona pellucida-like domains 1 transcript_id : NM_008411.3

name	1700007K09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124378003 GeneID:69318 MGI:1916568
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700007K09 gene transcript_id : NM_027037.2

name	1700063I17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351908 GeneID:68223 MGI:1915473
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700063I17 gene transcript_id : NM_183272.2

name	2310057M21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374062 GeneID:68277 MGI:1915527
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310057M21 gene transcript_id : NM_026655.3

name	Pstk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88014627 GeneID:214580 MGI:2685945
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoseryl-tRNA kinase transcript_id : NM_001039534.1

name	Ikzf5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254391 GeneID:67143 MGI:1914393
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : IKAROS family zinc finger 5 transcript_id : NM_175115.4

name	Brwd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26986547 GeneID:207425 MGI:1920230
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : WD repeat domain 11 product : bromodomain and WD repeat domain containing 2 protein_id : NP_758459.1

name	LOC100043150 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257722 GeneID:100043150
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479693.1

name	Fgfr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116089355 GeneID:14183 MGI:95523
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005007 - fibroblast growth factor receptor activity [Evidence IEA]; GO:0008201 - heparin binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IGI]; GO:0030282 - bone mineralization [Evidence IMP]; GO:0045165 - cell fate commitment [Evidence IDA]; GO:0007267 - cell-cell signaling [Evidence IMP]; GO:0048562 - embryonic organ morphogenesis [Evidence IMP]; GO:0050673 - epithelial cell proliferation [Evidence IMP]; GO:0008543 - fibroblast growth factor receptor signaling pathway [Evidence IGI]; GO:0030324 - lung development [Evidence IGI]; GO:0016331 - morphogenesis of embryonic epithelium [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP] [Evidence IGI]; GO:0002053 - positive regulation of mesenchymal cell proliferation [Evidence IGI]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0007435 - salivary gland morphogenesis [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform IIIb is encoded by transcript variant 2; keratinocyte growth factor receptor; seminal vesicle shape product : fibroblast growth factor receptor 2 isoform IIIb protein_id : NP_963895.2

name	Fgfr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116089349 GeneID:14183 MGI:95523
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005007 - fibroblast growth factor receptor activity [Evidence IEA]; GO:0008201 - heparin binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IGI]; GO:0030282 - bone mineralization [Evidence IMP]; GO:0045165 - cell fate commitment [Evidence IDA]; GO:0007267 - cell-cell signaling [Evidence IMP]; GO:0048562 - embryonic organ morphogenesis [Evidence IMP]; GO:0050673 - epithelial cell proliferation [Evidence IMP]; GO:0008543 - fibroblast growth factor receptor signaling pathway [Evidence IGI]; GO:0030324 - lung development [Evidence IGI]; GO:0016331 - morphogenesis of embryonic epithelium [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP] [Evidence IGI]; GO:0002053 - positive regulation of mesenchymal cell proliferation [Evidence IGI]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0007435 - salivary gland morphogenesis [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform IIIc is encoded by transcript variant 1; keratinocyte growth factor receptor; seminal vesicle shape product : fibroblast growth factor receptor 2 isoform IIIc protein_id : NP_034337.2

name	Ate1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71274127 CCDS:CCDS21901.1 GeneID:11907 MGI:1333870
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0004057 - arginyltransferase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0016598 - protein arginylation [Evidence IDA]; GO:0042176 - regulation of protein catabolism [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : arginine-tRNA-protein transferase 1 isoform 3 protein_id : NP_001025066.1

name	Ate1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542151 CCDS:CCDS21902.1 GeneID:11907 MGI:1333870
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0004057 - arginyltransferase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0016598 - protein arginylation [Evidence IDA]; GO:0042176 - regulation of protein catabolism [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : arginine-tRNA-protein transferase 1 isoform 1 protein_id : NP_038827.2

name	LOC100043163 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257725 GeneID:100043163
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479707.1

name	Nsmce4a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82915091 GeneID:67872 MGI:1915122
definition	codon_start : 1 product : non-SMC element 4 homolog A isoform 1 protein_id : XP_133876.5

name	Tacc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52486843 CCDS:CCDS21903.1 GeneID:57752 MGI:1928899
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS] codon_start : 1 note : isoform c is encoded by transcript variant 3 product : transforming, acidic coiled-coil containing protein 2 isoform c protein_id : NP_001004468.1

name	Tacc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52486915 CCDS:CCDS21904.1 GeneID:57752 MGI:1928899
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : transforming, acidic coiled-coil containing protein 2 isoform a protein_id : NP_996738.2

name	Tacc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52486864 CCDS:CCDS21905.1 GeneID:57752 MGI:1928899
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : transforming, acidic coiled-coil containing protein 2 isoform b protein_id : NP_067289.2

name	Btbd16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486658 GeneID:330660 MGI:3045247
definition	codon_start : 1 product : BTB (POZ) domain containing 16 protein_id : NP_001074507.1

name	EG434249 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82915067 GeneID:434249 MGI:3645136
definition	codon_start : 1 product : hypothetical protein protein_id : XP_489208.2

name	Plekha1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527162 CCDS:CCDS21907.1 GeneID:101476 MGI:2442213
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0008289 - lipid binding [Evidence IEA] codon_start : 1 product : pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 protein_id : NP_598703.1

name	Htra1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9625027 CCDS:CCDS21908.1 GeneID:56213 MGI:1929076
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0019838 - growth factor binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005520 - insulin-like growth factor binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0030514 - negative regulation of BMP signaling pathway [Evidence IDA]; GO:0030512 - negative regulation of transforming growth factor beta receptor signaling pathway [Evidence IDA]; GO:0006508 - proteolysis [Evidence IEA]; GO:0001558 - regulation of cell growth [Evidence IEA] codon_start : 1 exception : mismatches in translation note : insulin-like growth factor binding protein 5 protease product : protease, serine, 11 (Igf binding) protein_id : NP_062510.1

name	Dmbt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87239967 CCDS:CCDS21909.1 GeneID:12945 MGI:106210
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005622 - intracellular [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005044 - scavenger receptor activity [Evidence IEA] GO_process : GO:0001824 - blastocyst development [Evidence IMP]; GO:0001833 - inner cell mass cell proliferation [Evidence IDA]; GO:0030858 - positive regulation of epithelial cell differentiation [Evidence IDA] codon_start : 1 exception : mismatches in translation note : crp-ductin; vomeroglandin product : deleted in malignant brain tumors 1 protein_id : NP_031795.2

name	4933402N03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117935040 GeneID:233918 MGI:1914681
definition	codon_start : 1 product : hypothetical protein LOC233918 protein_id : NP_775585.1

name	5430419D17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116089316 CCDS:CCDS21911.1 GeneID:71395 MGI:1918645
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC71395 protein_id : NP_780375.2

name	LOC546006 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257727 GeneID:546006
definition	codon_start : 1 product : similar to deleted in malignant brain tumors 1 protein_id : XP_620573.4

name	LOC100043173 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257729 GeneID:100043173
definition	codon_start : 1 product : similar to hCG2040007 protein_id : XP_001479723.1

name	Cuzd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133778951 GeneID:16433 MGI:1202881
definition	GO_component : GO:0016021 - integral to membrane [Evidence NAS]; GO:0016020 - membrane [Evidence IEA]; GO:0042588 - zymogen granule [Evidence IDA]; GO:0042589 - zymogen granule membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008283 - cell proliferation [Evidence ISS]; GO:0007565 - pregnancy [Evidence NAS]; GO:0006931 - substrate-bound cell migration, cell attachment to substrate [Evidence ISS]; GO:0032023 - trypsinogen activation [Evidence IMP] codon_start : 1 note : integral membrane-associated protein 1 product : CUB and zona pellucida-like domains 1 protein_id : NP_032437.3

name	1700007K09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037157 CCDS:CCDS21912.1 GeneID:69318 MGI:1916568
definition	codon_start : 1 product : hypothetical protein LOC69318 protein_id : NP_081313.1

name	1700063I17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34304065 GeneID:68223 MGI:1915473
definition	codon_start : 1 product : hypothetical protein LOC68223 protein_id : NP_899095.1

name	2310057M21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311825 GeneID:68277 MGI:1915527
definition	GO_function : GO:0042802 - identical protein binding [Evidence IPI] codon_start : 1 product : hypothetical protein LOC68277 protein_id : NP_080931.1

name	Pstk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:88014628 CCDS:CCDS21914.1 GeneID:214580 MGI:2685945
definition	GO_function : GO:0016301 - kinase activity [Evidence IDA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IDA] GO_process : GO:0001514 - selenocysteine incorporation [Evidence IDA] codon_start : 1 product : phosphoseryl-tRNA kinase protein_id : NP_001034623.1

name	Ikzf5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982165 CCDS:CCDS21915.1 GeneID:67143 MGI:1914393
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger protein, subfamily 1A, 5 protein_id : NP_780324.2

name	LOC619876 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:619876
definition	number : 1 pseudo : _no_value

clone name	MSMg01-509K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469A16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-355C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515I07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-423E22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-395L16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-494J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254O21
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-419H04.T7 (MSMg01no419_h04.b1)	MSMg01-419H04.TJ (MSMg01no419_h04.g1)
ACC	AG514547	AG514548
length	787	837
length of high quality (start - end)	378 (78 - 455)	---
definition	CHROMAT_FILE: MSMg01no419_h04.b1 PHD_FILE: MSMg01no419_h04.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:38:59 2005	CHROMAT_FILE: MSMg01no419_h04.g1 PHD_FILE: MSMg01no419_h04.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:39:00 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TTTATACTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXCAAAACAGGA TCCGCGGAATTCATCCTTTCACAATTTAATACATTTGTATATTCTGTAAG AAATACTCTTAGCAGCATTATTGCAAGTACCTTTTGATAAAAATGAAAAC TAGAACAAACCTAAACTTAGCCCCTTTGTTACTTATCATTGAATACAACT AAATAACTCAACTATCAAAAAACTCACCAACTATATACATGAATGGTTTC CAGCGCATGTAGAGTCCTACCAAACATCTAATCAGCTTTAGCGCATTTCC ATCATCTGAGAAACAGTTTCCATCTGCTGGCAGTCAGCACGCTCAAAACA GCCAGCACTGGCATCTTTCTGGACTCCCAGCAGCAGGGCACAGCATCTTG TGGTGGCTCTGACTTGTTCTTCTCTGATAGTTAATGACGTTGAGCATCTT TTCATGAATGGCTTACTTTGTTCAGAAAATATCTATTTGAAACATTTTGC TCCCCTTAAAAATTTTACTGATTTATATATATGTTCCAGAAATCCCGCTT TTTAAAGACTTTCCTCCCTTTCCACCGGATTTTTAATTCCTCGGTCCCCG GTCTCTCCCCCTCCCCCCCCCCTTTCCTCCCCCCCCTTTTTTTCCTTAAC ACCCCCCCTTTTTCTTTTCCTTTTCTTTTTAACAAAACCTTTCTCCGGAA ACTCGCCCACCAACATGGTGTTTTTTTTTCAAAAAACCACCCCCGTTTTT TCCCCCTCCCCCCTGTTAAAATACATATTTCCCCCTT	GCGGGGGGGGGGGGGGGAGAGAACGAACAGCCGAGAGGGGGGGACGGGGG GAGCGGGGCGCGGAAAAACCGCGGAGACCCCCCCGGGCGGGCGCTGGTTA TCCCCGGGCAAAGGGAAAAGACGGGGGCTAGGGCCCCTGGGGNNGGGNNC GCCCCGGCTACAANGACGGAGGGAGGNGGGAACCCANAGGAATGTCACAG GAGGAAAGGGCCCCATAAGGCCTGGGGGGGGGGGTCAAGGAGATCCAGAA AACCCAAAGGGCGGGAAGGGGGGTCCAAAGGGAAAGGGGGAAAAAATTAA ATTTTGGGAAAAGGGGGGGGAACCCAGCGGGGGGCGGGGGGGGGGGGGGG GGCCCCACCCGGGGGAAGGGGAGGGGGGGAAAAAAGGGGAAAGGGGGGAA AACCCCCCGGGGGAAGAAGAGAGAACGGGGGGGGGGAGGAAAAAAAAAAA GGGGGGGAGGGTACGCCACCAACAGGGGGGGGGGGGTAAAAAAAGGAAAA GGCGCGGGGGGGGGGGGGGGGCGGGGAAACACGAGGGGGGGGGGGCGGGG GGAAAGTTTTTTTATGGGGACGGGAAGAGACCCCCGGGCGGGGGGAAGAA AACAAGGGGCGGGGCAGGCGGGGGAAGGAAAGGCCCACACTCATATGGGG CGGGGGGGGGGGAGGCGGACCGGGGGCGGAAAGGGAGGTAAAAAAGAGGG GGGGAGCGCACCTATCGACTAATAAAAAGAGAGGGGGGGAGAGGAAGGGG AGGCCGCGCGGTAGGAAGGGGGAAAGAGGGGGCGGGGCCCCGGGGGAGAA GGAAGAACGCGGAAGGGGGCGACACGACCGGCGGGGG
quality values	Open. Hide. 8 8 8 8 8 8 8 8 8 10 10 8 8 8 9 9 15 10 10 10 16 16 10 10 8 8 8 9 8 19 19 34 17 15 13 13 10 7 9 9 9 9 10 11 10 10 10 10 10 10 11 15 19 30 39 34 26 26 22 16 23 18 14 14 9 11 11 16 13 10 10 11 13 11 15 18 13 21 26 31 33 36 36 36 36 59 57 57 57 59 57 57 57 57 57 57 57 57 59 59 50 50 50 50 47 47 68 68 57 57 50 50 50 48 48 48 57 57 68 68 68 54 57 57 54 54 54 54 54 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 59 59 54 54 54 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 52 52 57 43 43 44 44 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 59 57 68 68 68 68 68 44 44 25 25 21 21 14 18 18 13 12 15 24 24 37 44 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 43 43 43 43 43 59 59 59 59 59 59 59 59 59 59 59 59 53 53 48 48 42 42 42 41 44 44 44 37 41 44 59 59 59 59 59 59 46 46 47 47 41 41 37 37 39 37 37 39 39 39 34 41 36 36 26 30 26 28 28 28 32 43 43 43 41 32 32 20 18 15 21 16 20 24 22 27 28 37 35 32 28 24 30 17 17 13 28 19 25 24 27 30 30 17 17 17 30 26 21 14 11 9 9 9 17 18 20 18 16 19 16 12 12 19 12 12 11 24 12 14 14 12 12 10 10 10 11 12 9 15 10 10 10 12 19 15 24 19 18 18 10 10 9 9 9 9 10 8 8 9 11 11 15 18 16 17 24 23 13 15 11 12 12 11 14 10 10 10 10 9 9 10 10 10 10 12 13 12 12 8 8 10 8 8 6 8 8 6 6 6 14 23 25 11 12 11 9 9 9 9 9 11 14 12 10 10 10 17 16 28 24 14 8 8 8 8 10 8 10 10 11 11 16 17 18 15 12 10 10 10 9 9 9 8 8 8 8 8 8 11 9 8 8 8 8 8 8 8 8 10 10 8 8 8 17 19 30 19 19 20 13 13 11 12 11 11 15 21 23 32 29 29 41 30 26 18 23 20 28 28 37 30 20 7 10 7 7 8 7 8 8 8 8 8 16 21 15 9 9 9 11 9 15 9 9 10 10 10 10 10 10 12 16 13 8 8 8 8 8 14 10 13 14 9 9 9 10 8 8 8 8 6 13 6 8 8 8 8 8 11 15 9 8 8 8 8 6 6 6 6 8 6 6 8 8 8 8 8 9 9 10 8 8 8 10 10 11 11 17 9 9 9 12 10 8 8 8 7 6 6 6 13 15 9 9 9 9 10 10 19 18 16 25 25 30 24 26 17 23 14 14 12 8 10 8 8 8 8 10 12 14 10 6 6 6 6 6 6 6 10 10 9 12 11 15 15 21 17	Open. Hide. 11 11 11 11 15 11 11 9 12 15 9 9 9 10 10 9 9 9 10 10 8 8 8 8 8 8 8 8 8 7 7 8 8 6 7 7 9 9 12 16 22 14 14 10 11 8 8 10 9 9 8 8 8 8 8 8 10 8 8 8 8 8 10 9 8 8 10 9 9 9 15 13 13 10 13 8 8 8 8 11 10 11 8 9 9 9 9 9 11 15 8 8 8 8 8 6 8 8 8 8 8 10 15 10 6 6 6 6 6 6 7 6 8 6 6 9 10 8 8 9 9 9 11 15 11 17 8 6 6 6 8 7 9 10 13 10 7 7 7 13 19 3 0 0 3 13 3 0 0 3 9 9 16 16 9 9 9 9 9 9 9 9 3 0 3 6 6 6 7 9 9 9 11 13 13 3 0 3 16 13 10 10 10 12 12 3 0 3 8 8 8 8 7 6 6 6 6 6 6 6 6 6 6 6 11 12 11 11 11 11 12 8 8 6 6 8 6 10 15 10 8 7 7 7 12 16 18 12 12 12 19 15 13 9 10 8 6 6 6 6 6 6 6 6 8 8 8 11 10 9 11 8 6 6 6 6 6 6 11 8 7 7 6 8 8 8 8 10 15 20 15 12 9 9 9 10 10 12 9 10 10 10 10 12 11 13 17 8 8 10 9 9 10 11 9 8 9 10 10 14 10 10 10 10 9 9 12 10 10 10 13 13 15 14 16 21 15 11 11 8 8 6 6 8 6 6 6 6 7 9 28 16 7 10 7 7 8 12 26 26 23 15 19 14 14 15 15 16 19 14 12 10 13 10 15 8 8 8 8 8 8 10 11 11 18 11 11 8 9 16 9 9 9 18 14 13 14 14 8 8 8 8 6 8 6 6 6 8 10 10 10 12 12 15 20 15 14 11 11 9 9 9 8 8 8 8 8 10 9 11 11 12 10 9 9 9 9 9 6 7 8 9 8 8 8 8 10 15 24 25 27 28 28 15 14 10 9 9 10 13 16 15 13 9 9 12 10 16 11 11 12 16 24 28 13 12 9 8 8 8 8 8 6 6 8 8 10 7 7 8 8 8 8 8 8 20 19 19 14 19 21 17 18 12 10 9 9 9 13 17 32 19 21 8 8 8 8 10 12 8 8 8 8 8 8 8 8 8 8 8 11 25 28 41 39 23 19 11 11 10 8 10 10 13 8 8 8 10 8 8 8 8 8 8 8 14 10 13 12 19 28 30 25 11 8 8 8 12 12 12 12 10 8 8 8 8 8 8 8 15 7 7 6 6 6 8 8 8 8 8 8 6 7 6 6 8 8 8 8 10 10 11 9 10 10 10 13 9 10 10 17 13 14 14 17 10 10 6 6 8 13 10 12 12 11 12 13 10 10 10 12 12 16 8 8 6 6 6 6 6 6 13 13 10 11 11 11 10 8 8 8 8 6 6 8 8 8 8 8 8 12 12 11 8 8 6 6 10 10 8 9 9 17 15 27 29 22 25 23 26 8 8 8 8 10 9 9 10 10 10 9 9 11 10 10 8 8 10 7 6 8 6 6 8 10 10 9 8 8 8 15 13 8 8 6 6 8 8 9 12 12 21 24 26 14 14 10 10 9 8 7 7 8 8 9 9 10 9 9 8 8 10 11 10 13 13 10 9 8 6 6 6 7 7 11 13 13 11 6 6 6 6 8 8 8 12 21 23 19 21 19 19 15 16 8 8 8 8 8 8 6 8 9 10 10 10 11 11 15 12 10 15 9 9 9 10 8 8 8 6 11 6 6 6 8 10 11 12 9 9 9 9 9 6 6 8 8 7 7 8 8 10 10 10 8 6 6 6 8 8 13 8 8 8 8 15 13 12 9 8 8 8 10 8 8 8 10 8 8 9 9 10 10 9 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no419_h04.b1 MSMg01no419_h04.b1 CHROMAT_FILE:
MSMg01no419_h04.b1 PHD_FILE: MSMg01no419_h04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:59 2005
         (378 letters)



>mm_chr7_137545497_137546274
          Length = 778

 Score =  716 bits (370), Expect = 0.0
 Identities = 376/378 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatacatttgtatattctgtaagaaatactcttagcagcattattgcaagtaccttttga 60
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 aatacatttgtatattctgtaagaaatactcttagcagcattattacaagtaccttttga 260

                                                                       
Query: 61  taaaaatgaaaactagaacaaacctaaacttagcccctttgttacttatcattgaataca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaaaatgaaaactagaacaaacctaaacttagcccctttgttacttatcattgaataca 320

                                                                       
Query: 121 actaaataactcaactatcaaaaaactcaccaactatatacatgaatggtttccagcgca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actaaataactcaactatcaaaaaactcaccaactatatacatgaatggtttccagcgca 380

                                                                       
Query: 181 tgtagagtcctaccaaacatctaatcagctttagcgcatttccatcatctgagaaacagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtagagtcctaccaaacatctaatcagctttagcgcatttccatcatctgagaaacagt 440

                                                                       
Query: 241 ttccatctgctggcagtcagcacgctcaaaacagccagcactggcatctttctggactcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttccatctgctggcagtcagcacgctcaaaacagccagcactggcatctttctggactcc 500

                                                                       
Query: 301 cagcagcagggcacagcatcttgtggtggctctgacttgttcttctctgatagttaatga 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 cagcagcagggcacagcatcttgtggtggctctgacttgttcttctctgatatttaatga 560

                             
Query: 361 cgttgagcatcttttcat 378
           ||||||||||||||||||
Sbjct: 561 cgttgagcatcttttcat 578


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space:   283761
Effective search space used:   283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information