MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-421D02
Chromosome	7 (Build37)
Map Location	120,228,499 - 120,228,874
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Usp47, Dkk3, Mical2, Micalcl, Parva, LOC627808, Tead1, 4632411J06Rik, LOC434227
Downstream gene	Arntl, A630005I04Rik, Btbd10, Pth, LOC100042736, Mlstd2, EG434228, Spon1, Rras2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Usp47 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74996 MGI:1922246
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dkk3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50781 MGI:1354952
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mical2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320878 MGI:2444947
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Micalcl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70877 MGI:1918127
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 4 Proteins

name	Parva (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57342 MGI:1931144
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC627808 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627808
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs, 18 Proteins pseudo : _no_value

name	Tead1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21676 MGI:101876
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4632411J06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78748 MGI:1925998
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC434227 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 256 ESTs, 9 Proteins pseudo : _no_value

name	Arntl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11865 MGI:1096381
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A630005I04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320743 MGI:2444645
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Btbd10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68815 MGI:1916065
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pth (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19226 MGI:97799
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042736 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042736
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Mlstd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67420 MGI:1914670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG434228 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434228 MGI:3645703
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Spon1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233744 MGI:2385287
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rras2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66922 MGI:1914172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Usp47 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:48928013 GeneID:74996 MGI:1922246
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin specific peptidase 47 transcript_id : NM_133758.2

name	Dkk3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560475 GeneID:50781 MGI:1354952
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dickkopf homolog 3 (Xenopus laevis) transcript_id : NM_015814.2

name	Mical2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375548 GeneID:320878 MGI:2444947
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microtubule associated monoxygenase, calponin and LIM domain containing 2 transcript_id : NM_177282.4

name	Micalcl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380922 GeneID:70877 MGI:1918127
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 4 Proteins product : MICAL C-terminal like, transcript variant 1 transcript_id : XM_133714.6

name	Micalcl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380925 GeneID:70877 MGI:1918127
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 Protein product : MICAL C-terminal like, transcript variant 2 transcript_id : XM_893565.2

name	Parva (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117676371 GeneID:57342 MGI:1931144
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : parvin, alpha transcript_id : NM_020606.5

name	Tead1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130427 GeneID:21676 MGI:101876
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TEA domain family member 1 transcript_id : NM_009346.2

name	4632411J06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125988386 GeneID:78748 MGI:1925998
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4632411J06 gene transcript_id : NM_175279.3

name	Arntl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131159 GeneID:11865 MGI:1096381
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aryl hydrocarbon receptor nuclear translocator-like transcript_id : NM_007489.3

name	A630005I04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366304 GeneID:320743 MGI:2444645
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A630005I04 gene transcript_id : NM_177248.3

name	Btbd10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130947 GeneID:68815 MGI:1916065
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BTB (POZ) domain containing 10 transcript_id : NM_133700.2

name	Pth (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134032033 GeneID:19226 MGI:97799
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : parathyroid hormone transcript_id : NM_020623.2

name	Mlstd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:74096447 GeneID:67420 MGI:1914670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : male sterility domain containing 2 transcript_id : NM_026143.2

name	Mlstd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68448550 GeneID:67420 MGI:1914670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : male sterility domain containing 2 transcript_id : NM_027379.2

name	EG434228 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380959 GeneID:434228 MGI:3645703
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : predicted gene, EG434228 transcript_id : XM_001001457.1

name	Spon1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21704173 GeneID:233744 MGI:2385287
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spondin 1, (f-spondin) extracellular matrix protein transcript_id : NM_145584.1

name	Rras2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13399307 GeneID:66922 MGI:1914172
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : related RAS viral (r-ras) oncogene homolog 2 transcript_id : NM_025846.1

name	Usp47 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:48928014 GeneID:74996 MGI:1922246
definition	GO_function : GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : ubiquitin specific protease 47 protein_id : NP_598519.2

name	Dkk3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7657027 CCDS:CCDS21752.1 GeneID:50781 MGI:1354952
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] [Evidence ISS]; GO:0005615 - extracellular space [Evidence ISS] GO_process : GO:0007275 - development [Evidence IEA]; GO:0030178 - negative regulation of Wnt receptor signaling pathway [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 product : dickkopf homolog 3 protein_id : NP_056629.1

name	Mical2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893359 CCDS:CCDS21753.1 GeneID:320878 MGI:2444947
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006725 - aromatic compound metabolism [Evidence IEA]; GO:0006118 - electron transport [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : flavoprotein oxidoreductase MICAL2 protein_id : NP_796256.1

name	Micalcl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94380923 GeneID:70877 MGI:1918127
definition	codon_start : 1 product : MICAL C-terminal like isoform 1 protein_id : XP_133714.5

name	Micalcl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82907428 GeneID:70877 MGI:1918127
definition	codon_start : 1 product : MICAL C-terminal like isoform 2 protein_id : XP_898658.1

name	Parva (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982526 GeneID:57342 MGI:1931144
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005925 - focal adhesion [Evidence IDA]; GO:0030027 - lamellipodium [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007155 - cell adhesion [Evidence IDA] codon_start : 1 note : actopaxin product : parvin, alpha protein_id : NP_065631.3

name	Tead1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678275 GeneID:21676 MGI:101876
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IDA] [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence IGI] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : TEA domain family member 1 protein_id : NP_033372.1

name	4632411J06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125988387 GeneID:78748 MGI:1925998
definition	GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : hypothetical protein LOC78748 protein_id : NP_780488.2

name	A630005I04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893309 GeneID:320743 MGI:2444645
definition	codon_start : 1 product : hypothetical protein LOC320743 protein_id : NP_796222.1

name	Arntl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680732 GeneID:11865 MGI:1096381
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0000155 - two-component sensor activity [Evidence IEA] GO_process : GO:0007623 - circadian rhythm [Evidence IMP] [Evidence IDA]; GO:0000060 - protein import into nucleus, translocation [Evidence IDA]; GO:0042176 - regulation of protein catabolism [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 product : aryl hydrocarbon receptor nuclear translocator-like protein_id : NP_031515.1

name	Btbd10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794234 CCDS:CCDS21755.1 GeneID:68815 MGI:1916065
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0008076 - voltage-gated potassium channel complex [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA] codon_start : 1 product : K+ channel tetramerization protein protein_id : NP_598461.1

name	Pth (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10181174 CCDS:CCDS21756.1 GeneID:19226 MGI:97799
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005179 - hormone activity [Evidence IDA] GO_process : GO:0006874 - calcium ion homeostasis [Evidence ISS]; GO:0007189 - G-protein signaling, adenylate cyclase activating pathway [Evidence ISS]; GO:0007595 - lactation [Evidence IEA] codon_start : 1 product : parathyroid hormone protein_id : NP_065648.1

name	Mlstd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:74096448 GeneID:67420 MGI:1914670
definition	GO_component : GO:0005777 - peroxisome [Evidence IDA] GO_function : GO:0050062 - long-chain-fatty-acyl-CoA reductase activity [Evidence IDA] GO_process : GO:0010025 - wax biosynthesis [Evidence TAS] codon_start : 1 product : male sterility domain containing 2 protein_id : NP_080419.2

name	Mlstd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68448551 GeneID:67420 MGI:1914670
definition	GO_component : GO:0005777 - peroxisome [Evidence IDA] GO_function : GO:0050062 - long-chain-fatty-acyl-CoA reductase activity [Evidence IDA] GO_process : GO:0010025 - wax biosynthesis [Evidence TAS] codon_start : 1 product : male sterility domain containing 2 protein_id : NP_081655.2

name	EG434228 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94380960 GeneID:434228 MGI:3645703
definition	codon_start : 1 product : hypothetical protein LOC434228 protein_id : XP_001001457.1

name	Spon1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704174 CCDS:CCDS21757.1 GeneID:233744 MGI:2385287
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA] codon_start : 1 product : spondin 1, (f-spondin) extracellular matrix protein protein_id : NP_663559.1

name	Rras2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13399308 CCDS:CCDS21758.1 GeneID:66922 MGI:1914172
definition	GO_component : GO:0005622 - intracellular [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0050875 - cellular physiological process [Evidence IPI] [Evidence IDA]; GO:0007265 - Ras protein signal transduction [Evidence IDA] codon_start : 1 exception : mismatches in translation product : related RAS viral (r-ras) oncogene homolog 2 protein_id : NP_080122.1

name	LOC100042736 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042736
definition	number : 1 pseudo : _no_value

name	LOC100042736 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042736
definition	number : 2 pseudo : _no_value

name	LOC627808 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257668 GeneID:627808
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs, 18 Proteins product : similar to SPBPJ4664.02 pseudo : _no_value transcript_id : XR_033822.1

name	LOC434227 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257669 GeneID:434227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 256 ESTs, 9 Proteins product : similar to ribosomal protein L7a pseudo : _no_value transcript_id : XR_033835.1

clone name	MSMg01-353B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047A16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-294H20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-451M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497D16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-468P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304O04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-421D02.T7 (MSMg01no421_d02.b1)	MSMg01-421D02.TJ (MSMg01no421_d02.g1)
ACC	AG515879	AG515880
length	808	853
length of high quality (start - end)	390 (80 - 469)	---
definition	CHROMAT_FILE: MSMg01no421_d02.b1 PHD_FILE: MSMg01no421_d02.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:41:16 2005	CHROMAT_FILE: MSMg01no421_d02.g1 PHD_FILE: MSMg01no421_d02.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:41:16 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAAATCACGCGGA ATTCACTAAACTCCATCCCCCAGAAGCCACACAGCTCTAAGAGGCTCAGT GCACAATGGTCTCTGGGGGAAGGCCTGGGCGATGACATGTTTAATTTGAC GTTTTCTGTCTTCTCCCACACCCATGCAGTTATCAAAATCCCCAAATCAA TCTCCCTGACTCCTCTTCCTTCAACACATTAGTGTTTACCCACTCCCTGA ACCCAGGCACTGACACAACAGTCCTGAAGAATGGAGATCAGTCGCTGACC TCACACGCTTTCTAGATTGAGTAAGTTTATTATGTGACCTCTCTGTGATA TGGTTAAGAAGAAAGTTTTATTGCGAAACTGTTTCCCATCTACCAAAAGA GTCATTTCCTTTACCCCTGGCAGAAGGGACATATTGGAGAGAAAGAACAG CCAGAAGAATGGACCTGACCAGGATCAGGGGAGAATAACATGATGAGAGA GAATATAGGAGAGCGTAGTGAGAGGAGTTTCACATTTATTGTTGTTTTAT CCTTACTCTCACTTTATACAATTTCATTTCTCATATATAATCTTTCTTTA CACTACTTTTTATTCTATTTTCTATTTATTAATACTACTCTTTCCACTCT CTCTTCTCACCTCACTTTATTCTCTCTTATATTTTTAATCTCTTCCCTCA TCTTCATTCCTCTATATTTTTTCTCTCTTCCTCTATATTTATACCCCTTT ATCCTGTCCTTCATCTCCCTATTACATACTTCATTACCTACTTATTCTTA CTCCTTCG	TATTTTATTTTAAAAAAANANTTTCTTTATCAATATAAAGANGNAAAGAG GANNTTACAAATAAAAAGGAAATGAAAAGTATAGTTAAATTTTAGATTAT ATTTTTTTTTTTATATTTATTATTATATTATTAATAAATATATAAATAGA TTAAAGATTATATATTTATAAGAATTAAATCTAAGTTTAGACGTATTTAG TGAATAGTTAAAAAAGTAGAAAGCTTAATATAGAATTATTTCGATTTATA TATAATATTCTTTTTTATTAAAAACAAATAGTAATTATATATCTATAAAA AGAAAAAAAAAATTTTTTTTTATTTTATTATATAATTAATATTAAAAAAA TTATAATATTTTATTTTATTAATAATTTTATTATTATTAATATTTTTTTA ATTAATAATAAATAATTTAATTTATTTTTTTATCTTATTTTTTTTTTATT TATATAATATTTTAATAATAATATTAATTTAAATTATATTTTATATTAAT TTTTATTTTATTTATATTTTTTATATATATATTTTATTTAAAATCATATT ATTTTATTATTTCATTTATTTTTTAAAATAATTTTATATTATTACAAATT TATAATAAATATAAAAAATTATTATTTTTTAATAAATATATAAATAAATA TTTATATTTTTAAATTTAATTATATTAATTTATCTAATATTTTAATATAT AATCATAAACTAATTTATAATAATATATAACTAAATATAATATAATAAAT ATTAATAATTAAATACCATTTTTATATTAATTATATTCAAATTATATATA TTATATCATTATATATCAATTTATTAATTTAATCTAAACATTTTTTTATT ATC
quality values	Open. Hide. 6 6 6 7 15 27 33 39 30 30 22 26 17 23 15 14 19 23 23 29 29 39 34 32 28 33 33 23 25 15 12 9 9 9 9 12 8 9 8 8 8 6 8 8 8 10 15 26 24 30 28 33 44 36 37 28 28 23 23 32 33 23 10 9 9 9 9 9 12 23 23 12 12 12 12 17 21 28 27 23 23 19 30 35 53 57 57 57 43 43 25 25 34 43 43 50 53 50 50 50 68 26 27 16 16 15 26 34 68 68 68 46 57 44 39 35 59 41 28 26 28 28 30 37 32 44 35 42 43 47 57 57 57 57 57 48 48 48 46 46 43 44 44 57 47 47 47 57 57 57 43 43 43 50 43 44 50 57 57 68 68 57 57 57 54 50 44 38 35 35 35 35 31 29 44 38 43 35 35 44 44 57 52 52 52 57 57 57 50 57 43 42 38 37 43 43 52 57 57 35 35 43 57 59 68 68 57 57 52 52 52 57 57 57 57 57 68 68 59 57 57 52 52 52 52 52 57 57 43 36 20 20 36 32 43 46 57 50 54 59 59 59 59 59 59 59 48 43 37 43 43 57 57 57 44 41 27 20 21 31 36 44 43 43 43 42 42 30 32 30 36 41 44 47 57 44 44 37 37 43 44 57 54 54 47 44 43 44 44 43 48 48 57 68 68 68 68 54 54 48 57 48 59 57 59 48 48 48 48 57 57 47 47 37 44 44 48 48 48 48 59 59 47 31 21 21 12 12 12 11 13 13 21 23 37 41 43 48 50 50 59 59 59 59 43 43 43 57 57 57 43 43 43 59 59 59 43 48 48 59 30 34 28 26 35 42 42 54 57 57 48 44 40 39 35 32 44 44 44 44 30 30 30 39 44 57 59 59 57 57 57 59 41 41 27 23 23 28 28 35 42 42 48 57 57 59 47 54 54 54 57 57 57 57 57 57 59 59 54 47 59 48 59 48 48 37 44 30 30 33 39 59 59 41 30 18 12 12 12 12 18 21 30 30 30 36 28 28 20 21 15 18 14 12 12 15 19 23 34 34 28 28 28 32 32 28 28 13 13 12 21 12 14 14 26 22 23 23 20 18 18 18 12 11 24 21 24 18 18 18 31 24 18 12 11 11 11 11 11 16 16 23 27 19 12 12 10 13 12 11 11 11 16 10 10 10 9 9 10 18 12 12 15 12 11 11 8 8 8 8 8 8 8 9 9 9 9 15 16 11 8 12 8 8 8 10 10 9 9 9 9 9 8 8 6 6 8 8 11 10 10 10 10 10 12 12 12 8 8 8 8 8 12 8 8 6 6 8 8 8 6 6 8 8 8 8 6 6 6 8 8 8 8 8 8 8 9 9 10 8 8 8 8 8 8 9 11 11 8 8 6 6 8 8 8 8 8 8 8 10 8 8 6 10 8 11 10 8 10 8 8 6 6 8 8 8 8 8 10 10 13 12 9 10 10 9 11 11 11 9 7 8 8 8 8 8 8 8 8 8 8 11 9 9 10 13 15 9 10 10 8 8 8 13 10 10 8 8 8 8 6 8 13 12 10 10 9 8 8 8 8 8 9 11 9 9 9 8 8 8 8 8 6 10 6 7 8 8 13 8 10 10 10 13 11 12 12 12 12 14 15 19 19 12 8 8 8 8 8 8 9 12 10 13 8 8 8 10 7 7 9 9 10 10 9 9 10 10 8 13 7 6 8 8 9 9 9 13 13 10 8 8 8 8 8 11 10 9 9 8 8 8 10 8 8 8 8 8 9 9 9 9 10 13 16 8 11 8 8 8 8 8 8 8 8 8 11 16 17 18 11 9 9 9 9 9 9 9	Open. Hide. 6 8 6 6 8 8 8 8 12 9 9 9 9 19 16 19 19 3 0 3 0 3 15 10 10 9 12 10 6 6 8 8 6 6 6 8 8 8 7 8 3 0 3 0 3 8 7 7 7 9 9 3 0 0 3 12 9 9 11 11 12 9 9 9 9 9 9 9 9 11 13 8 9 9 9 12 9 9 8 8 8 8 8 8 8 9 9 11 11 12 12 17 13 11 9 9 11 8 8 6 6 8 8 9 13 15 16 14 16 12 15 11 15 8 8 8 8 11 8 8 10 16 12 11 8 8 6 6 12 8 8 8 10 10 11 11 12 10 10 9 10 10 9 8 8 8 8 8 8 6 6 8 8 8 8 8 10 8 6 6 10 14 13 10 10 9 9 9 9 10 9 11 9 15 9 8 7 7 8 7 7 6 8 8 8 8 8 8 8 8 8 6 6 6 6 8 10 8 8 8 9 9 10 10 8 9 11 8 8 9 9 10 8 8 8 9 9 8 10 8 10 8 8 8 8 9 9 8 8 10 8 8 8 8 8 8 8 8 12 10 9 8 8 8 8 8 6 10 11 10 8 8 6 6 6 6 8 8 9 9 9 11 9 8 8 9 7 10 10 10 9 7 8 6 6 6 6 7 8 8 8 8 8 8 6 8 6 6 8 8 8 8 6 6 8 8 13 13 14 8 8 6 6 15 17 21 19 18 13 9 9 9 10 12 15 32 32 28 15 15 9 9 9 11 14 12 13 10 8 11 8 10 8 8 8 8 8 8 9 10 9 9 9 9 10 9 10 13 15 8 9 9 9 11 10 10 8 6 6 8 6 8 10 8 11 8 8 7 7 8 8 8 6 7 6 10 15 14 10 9 9 9 13 13 12 9 9 9 8 8 8 8 8 13 10 9 8 8 8 8 14 19 16 15 10 8 8 12 8 8 8 8 8 8 8 10 10 10 10 10 8 8 8 8 8 6 7 8 9 8 8 11 11 8 8 11 8 8 8 11 10 12 15 15 12 12 11 15 10 9 8 12 12 11 8 8 8 8 8 8 8 10 9 9 9 9 9 9 8 8 10 10 8 9 11 16 10 8 8 8 8 8 10 13 8 10 9 9 10 10 10 10 10 10 10 11 8 8 9 14 11 9 9 9 10 12 12 16 11 11 11 17 18 11 11 10 9 9 12 9 8 8 8 9 12 11 8 8 8 8 10 10 8 8 8 8 8 8 8 8 8 8 9 9 9 9 9 11 11 13 8 9 9 12 10 12 10 10 9 10 11 8 8 8 8 13 8 10 10 10 11 8 8 8 8 8 8 8 8 8 8 8 8 7 7 7 6 8 8 10 11 11 10 8 8 8 9 8 10 11 8 8 7 6 8 8 12 12 8 10 8 8 8 8 10 10 11 8 8 8 8 8 8 8 8 10 10 10 10 6 6 8 8 8 8 8 8 10 10 8 8 8 8 22 13 14 16 10 13 6 6 8 8 12 14 19 18 18 10 10 10 10 9 9 9 9 8 8 17 8 9 9 10 15 19 17 13 7 6 8 6 6 6 6 8 8 9 10 11 12 12 18 17 13 15 9 8 8 8 8 8 9 8 8 8 15 8 8 8 8 6 6 8 6 8 8 8 8 8 9 10 8 9 7 8 8 15 13 13 8 8 8 10 15 20 13 15 8 11 11 6 8 6 6 6 11 9 10 10 15 13 17 17 18 16 15 12 10 10 6 6 6 7 7 8 8 8 9 10 9 9 8 8 11 8 8 8 13 8 9 9 12 12 11 8 8 8 8 8 10 8 8 6 7 13 7 7 10 8 10 8 8 8 8 15 8 8 6 6 8 8 11 8 16 20 11 8 8 8 8 13 8 8 8 11 11 10 10 10 8 8 10 8 8 8 8 8 8 7 7 8 18 18 23 13 8 8 9 8 8 8 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no421_d02.b1 MSMg01no421_d02.b1 CHROMAT_FILE:
MSMg01no421_d02.b1 PHD_FILE: MSMg01no421_d02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:16 2005
         (390 letters)



>mm_chr7_120228299_120229088
          Length = 790

 Score =  673 bits (348), Expect = 0.0
 Identities = 369/376 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   cacagctctaagaggctcagtgcacaatggtctctgggggaaggcctgggcgatgacatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 cacagctctaagaggctcagtgcacaatggtctctgggggaaggcctgggcgatgacatg 517

                                                                       
Query: 61  tttaatttgacgttttctgtcttctcccacacccatgcagttatcaaaatccccaaatca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tttaatttgacgttttctgtcttctcccacacccatgcagttatcaaaatccccaaatca 457

                                                                       
Query: 121 atctccctgactcctcttccttcaacacattagtgtttacccactccctgaacccaggca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 atctccctgactcctcttccttcaacacattagtgtttacccactccctgaacccaggca 397

                                                                       
Query: 181 ctgacacaacagtcctgaagaatggagatcagtcgctgacctcacacgctttctagattg 240
           ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 396 ctgacgcaacagtcctgaagaaaggagatcagtcgctgacctcacacgctttctagattg 337

                                                                       
Query: 241 agtaagtttattatgtgacctctctgtgatatggttaagaagaaagttttattgcgaaac 300
            ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtaagttgatgatgtgacctctctgtgatatggttaagaagaaagttttattgcgaaac 277

                                                                       
Query: 301 tgtttcccatctaccaaaagagtcatttcctttacccctggcagaagggacatattggag 360
           || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 276 tggttcccatctaccaaaagagtcatttcctttacccctggcagaagggacatactggag 217

                           
Query: 361 agaaagaacagccaga 376
           ||||||||||||||||
Sbjct: 216 agaaagaacagccaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space:   297561
Effective search space used:   297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information