Query= MSMg01no424_g17.b1 MSMg01no424_g17.b1 CHROMAT_FILE:
MSMg01no424_g17.b1 PHD_FILE: MSMg01no424_g17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:22 2005
(674 letters)
>mm_chr7_103192473_103193546
Length = 1074
Score = 1288 bits (666), Expect = 0.0
Identities = 672/674 (99%)
Strand = Plus / Plus
Query: 1 cacatggctatacacaaatgtatatctggcctggccaggctggtgagatgaccagtttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacatggctatacacaaatgtatatctggcctggccaggctggtgagatgaccagtttga 260
Query: 61 gtcccagaatctaatatgaagaaaagactcaactcctgaaatttgtcttttgttcttcac 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcccagaatctaatatgaaggaaagactcaactcctgaaatttgtcttttgttcttcac 320
Query: 121 tcctctagacccgtactatggcacatgtacacctgtattccctccttcctttcctctctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctctagacccgtactatggcacatgtacacctgtattccctccttcctttcctctctc 380
Query: 181 cctctctctttctctctcacgtgcacacaataggaattattgttaaaatgtaatataaaa 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 cctctctctttctctctcacgtgcacacagtaggaattattgttaaaatgtaatataaaa 440
Query: 241 gaagtaatctggcattcacatcaaaaagcagtgctggagaaacctaacatcaacatatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaagtaatctggcattcacatcaaaaagcagtgctggagaaacctaacatcaacatatac 500
Query: 301 aggaatgaacataaacacagccaacacaaaaattaattaaaaagagatcagaagcctcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggaatgaacataaacacagccaacacaaaaattaattaaaaagagatcagaagcctcaa 560
Query: 361 actttagagatgctaaaggaagcctaagattataggcatgagcaagaacttctgagaagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actttagagatgctaaaggaagcctaagattataggcatgagcaagaacttctgagaagg 620
Query: 421 actgaaccagcccaggaaattatcccaagagttgctgaagggggttgcatgagatttgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 actgaaccagcccaggaaattatcccaagagttgctgaagggggttgcatgagatttgga 680
Query: 481 agttcctccacagcaaaggaaacaatcatgattgtgaaaaaaacagatacagagtgggac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agttcctccacagcaaaggaaacaatcatgattgtgaaaaaaacagatacagagtgggac 740
Query: 541 tatagctttcccagctgtcttagggttttactgctgtgagcagataccatgaccaagaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tatagctttcccagctgtcttagggttttactgctgtgagcagataccatgaccaagaca 800
Query: 601 actctcacaaggacgacatttaatttaagtgggaatggcttacaggttcagtggttcagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 actctcacaaggacgacatttaatttaagtgggaatggcttacaggttcagtggttcagc 860
Query: 661 ccattatcatcaag 674
||||||||||||||
Sbjct: 861 ccattatcatcaag 874
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_g17.g1 MSMg01no424_g17.g1 CHROMAT_FILE:
MSMg01no424_g17.g1 PHD_FILE: MSMg01no424_g17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:22 2005
(279 letters)
>mm_chr7_103225857_103226536
Length = 680
Score = 518 bits (268), Expect = e-151
Identities = 277/280 (98%), Gaps = 1/280 (0%)
Strand = Plus / Minus
Query: 1 actctccagggcgaactgtcctatgatcactctaattataaaccacccctacctccttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 actctccagggcgaactgtcctatgatcactctaattataaaccacccctacctccttcc 421
Query: 61 tctcagtttgagtcaaactaaaataaatctcttcttgacattttacttctctcatttata 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 420 tctcagtttgagtcaaactaaaataaatctcttcttgacattttacttctctcagttata 361
Query: 121 ggaactgtgaacaaataatgtggtgttgaggaattttttcttt-actaacaactggaaag 179
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 360 ggaactgtgaacaaataatgtggtgttgaggaatttttttttttactaacaactggaaag 301
Query: 180 aaatccatattatccaatgggtggataagagattgcattttcttatgttcttttaggatg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aaatccatattatccaatgggtggataagagattgcattttcttatgttcttttaggatg 241
Query: 240 gatggggatactccttgggcatttttattgcctcctataa 279
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gatggggatactccttgggcatttttattgcctcctataa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 680
Length adjustment: 9
Effective length of query: 270
Effective length of database: 671
Effective search space: 181170
Effective search space used: 181170
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
