Query= MSMg01no426_f08.b1 MSMg01no426_f08.b1 CHROMAT_FILE:
MSMg01no426_f08.b1 PHD_FILE: MSMg01no426_f08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:50 2005
(442 letters)
>mm_chr7_106584654_106585496
Length = 843
Score = 824 bits (426), Expect = 0.0
Identities = 438/442 (99%), Gaps = 1/442 (0%)
Strand = Plus / Minus
Query: 2 tcttcccggctcctcactgctcagcccctcctcctgtgtgtgaccccctgaccccagctt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tcttcccggctcctcactgctcagcccctcctcctgtgtgtgaccccctgaccccagctt 464
Query: 62 catctcttcagctgggaagggttctgatttcctatggagttgggtcacataccacccact 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 catctcttcagctgggaagggttctgatttcctatggagttgggtcacataccacccact 404
Query: 122 ctgaaagccttcctggatgaagttccactccctcagcctactgtactcctcagcaccaat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ctgaaagccttcctggatgaagttccactccctcagcctactgtactcctcagcaccaat 344
Query: 182 gcttgtcttttctaaatctactttgtgcccctagatggtgtggggtctgttagtattgat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gcttgtcttttctaaatctactttgtgcccctagatggtgtggggtctgttagtattgat 284
Query: 242 gactaggaaagagggtgtctggg-agaaaaacatgctctagcttcacagaatcattttac 300
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 283 gactaggaaagagggtgtcaggggagaaaaacatgctctagcttcacagaatcattttac 224
Query: 301 cccatatcaggaactaaatgtgtttggagccagactgcatggaaatctcaaatccccacc 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 223 cccatatcaggaactaaatgtgtttggaaccagactgcatggaaatctcaaatccccacc 164
Query: 361 taccactgacaggctgtgcatccctggacagttgacttaacctctgtgctttctgtgtgt 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 ttccactgacaggctgtgcatccctggacagttgacttaacctctgtgctttctgtgtgt 104
Query: 421 gtgtgagtgacatgcaataata 442
||||||||||||||||||||||
Sbjct: 103 gtgtgagtgacatgcaataata 82
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 843
Length adjustment: 9
Effective length of query: 433
Effective length of database: 834
Effective search space: 361122
Effective search space used: 361122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_f08.g1 MSMg01no426_f08.g1 CHROMAT_FILE:
MSMg01no426_f08.g1 PHD_FILE: MSMg01no426_f08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:50 2005
(405 letters)
>mm_chr7_106396669_106397473
Length = 805
Score = 667 bits (345), Expect = 0.0
Identities = 386/407 (94%), Gaps = 13/407 (3%)
Strand = Plus / Plus
Query: 1 cactggtgaaaccacgagtggctgttgcttgcatcacctctcttctgtaatccctgtctt 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 cactggtgaaaccacgagtggctgttgcttgcatcacctctcttctgtaacccctgtctt 260
Query: 61 ttgggaaactattaactgccaatttatttgcttctttttgtctctgttctctttcaagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgggaaactattaactgccaatttatttgcttctttttgtctctgttctctttcaagcc 320
Query: 121 tctcttttggtttctcccactgtgaaacttctgtgtgacaactgtagtagtatttttttc 180
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 321 actcttttggtttctcccactgtgaaacttctgtgcaacaactgtagtagtaattttttc 380
Query: 181 cagatgagctaatgtgctcagatcaatcatctgcagaatcataaagtgcacctgaagttt 240
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 381 cagatgagctaatgtgctcagaccaatcatctgcagaatcataaagtgcatctgaagttt 440
Query: 241 tgcttggattattgcttggattagaagaatgtgaatttgaactattaagtgcactgtggt 300
||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 tgcttggattattgcttggattagaagaatgtgaatttgaactat----------gtggt 490
Query: 301 tgtgtgagttttcttgtggagagtaactggtcccaccgaccctttctctaactctctgag 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 491 tgtgtgagttttcttgtggagagtaactggtcccaccgcccctttctctaactctctgag 550
Query: 361 tgtgcacgtttttggccttgt---gacctgtgctgtcactgtatttg 404
||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 551 tgtgcacgtttttggccttgttgtgacctgtgctgtcactgtatttg 597
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space: 315216
Effective search space used: 315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
