Query= MSMg01no431_b03.b1 MSMg01no431_b03.b1 CHROMAT_FILE:
MSMg01no431_b03.b1 PHD_FILE: MSMg01no431_b03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:13 2005
(448 letters)
>mm_chr7_140774447_140775295
Length = 849
Score = 814 bits (421), Expect = 0.0
Identities = 436/441 (98%), Gaps = 1/441 (0%)
Strand = Plus / Plus
Query: 9 ttcaaggagaatgtccctcagatctggtgatgacatagccaacagattattacccc-aac 67
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 209 ttcaaggagaatgtctctcagatctggtgatgacatagccaacagattattacccccaac 268
Query: 68 gaaagtgcctggtttttctatagcaaagaagtagatagagcccaagtcaggtctgctgaa 127
||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||
Sbjct: 269 gaaagtgcctggtttttctatggcaaagaagcagatagagcccaggtcaggtctgctgaa 328
Query: 128 aatgtgtaaacttggccattcatgtagtgaatttggggagaggctggaccaagggcattt 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aatgtgtaaacttggccattcatgtagtgaatttggggagaggctggaccaagggcattt 388
Query: 188 gatgaggtttcttatagaggtcctctggccatgtctggtcccatcattctctctgctaag 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gatgaggtttcttatagaggtcctctggccatgtctggtcccatcattctctctgctaag 448
Query: 248 tgctgaaatggatcaaaatcattgctgaagtgcatgaattgtgtgggtacttagattaga 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tgctgaaatggatcaaaatcattgctgaagtgcatgaattgtgtgggtacttagattaga 508
Query: 308 ggtcagagtagtatcccgggaacgtattagtagataaactgggagctctttctccctgtg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ggtcagagtagtatcccgggaacgtattagtagataaactgggagctctttctccctgtg 568
Query: 368 tatttggtagccacacccagagccatctgtcctgtctcttacaaccgcccccgccaccct 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tatttggtagccacacccagagccatctgtcctgtctcttacaaccgcccccgccaccct 628
Query: 428 gtccctgtgctcatatagtca 448
|||||||||||||||||||||
Sbjct: 629 gtccctgtgctcatatagtca 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 849
Length adjustment: 10
Effective length of query: 438
Effective length of database: 839
Effective search space: 367482
Effective search space used: 367482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_b03.g1 MSMg01no431_b03.g1 CHROMAT_FILE:
MSMg01no431_b03.g1 PHD_FILE: MSMg01no431_b03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:13 2005
(352 letters)
>mm_chr7_140933960_140934711
Length = 752
Score = 681 bits (352), Expect = 0.0
Identities = 352/352 (100%)
Strand = Plus / Minus
Query: 1 tctaacctgaatgtgtcttctgtgtaggtactgtactgatgacatgctgcagagagagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tctaacctgaatgtgtcttctgtgtaggtactgtactgatgacatgctgcagagagagat 493
Query: 61 gatgtccaaccctttcctgggtagctatggcgtcatcatcttggacgatgtccacgagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gatgtccaaccctttcctgggtagctatggcgtcatcatcttggacgatgtccacgagag 433
Query: 121 aagcctggcgactgacgtgctgctcggactccttaaagatgtgctgctggcaagaccaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aagcctggcgactgacgtgctgctcggactccttaaagatgtgctgctggcaagaccaga 373
Query: 181 gctgaagctcatagttaactgctcgcctctcctcaccagtaaactcagttcctactatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gctgaagctcatagttaactgctcgcctctcctcaccagtaaactcagttcctactatgg 313
Query: 241 agacgtgcctgtcatagaagtgagaaataagcacccggtggaggtggtgtaccttagtgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 agacgtgcctgtcatagaagtgagaaataagcacccggtggaggtggtgtaccttagtgg 253
Query: 301 ggctcagaaggattccttcgagtctgtcatacgccttatctttgaaatccac 352
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ggctcagaaggattccttcgagtctgtcatacgccttatctttgaaatccac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 752
Length adjustment: 9
Effective length of query: 343
Effective length of database: 743
Effective search space: 254849
Effective search space used: 254849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
