Query= MSMg01no431_e13.b1 MSMg01no431_e13.b1 CHROMAT_FILE:
MSMg01no431_e13.b1 PHD_FILE: MSMg01no431_e13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:32 2005
(440 letters)
>mm_chr7_149767227_149768067
Length = 841
Score = 814 bits (421), Expect = 0.0
Identities = 436/441 (98%), Gaps = 1/441 (0%)
Strand = Plus / Minus
Query: 1 gggtcacccaagttcagtacctca-gggggtcacaaatgccactaggggggcaggacaca 59
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 641 gggtcacccaagttcagtacctcaggggggtcacaaatgccactaggggggcaggacaca 582
Query: 60 tgcattttctaggctggtacctcgtggactcggactcccaaatcaacaagatcggcttac 119
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 581 tgcattttctaggctggtacctcgtggactcggactcccaaatcaacaaggtcggcttac 522
Query: 120 tctctgcaaagaatcctttgtgtgtaaagaccagggttgccgcacggcggcagtgaagtg 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tctctgcaaagaatcctttgtgtgtaaagaccagggttgccgcacggcggcagtgaagtc 462
Query: 180 tcgtacatcgcagtcctgaaacggattgcaactgattgagttttctcccctatcaccatc 239
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tcgtacatcgcagtcctaaaacggattgcaactgattgagttttctcccctatcaccatc 402
Query: 240 tatgatcccatagttatgggcttcatgaggccaggggttcatgctagtccttgataaaac 299
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tatgatcccatagtcatgggcttcatgaggccaggggttcatgctagtccttgataaaac 342
Query: 300 gttctcaagagctatctcaggtatctgacttatagggttctggggccatcagcgctattg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gttctcaagagctatctcaggtatctgacttatagggttctggggccatcagcgctattg 282
Query: 360 tgtgaaaattgaagtatagctactatgtgtggtgatcatggaatgtattgcagtaccata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tgtgaaaattgaagtatagctactatgtgtggtgatcatggaatgtattgcagtaccata 222
Query: 420 atgcagaccccactaagcatg 440
|||||||||||||||||||||
Sbjct: 221 atgcagaccccactaagcatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 841
Length adjustment: 9
Effective length of query: 431
Effective length of database: 832
Effective search space: 358592
Effective search space used: 358592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_e13.g1 MSMg01no431_e13.g1 CHROMAT_FILE:
MSMg01no431_e13.g1 PHD_FILE: MSMg01no431_e13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:32 2005
(443 letters)
>mm_chr7_149595087_149595931
Length = 845
Score = 826 bits (427), Expect = 0.0
Identities = 440/445 (98%), Gaps = 2/445 (0%)
Strand = Plus / Plus
Query: 1 aatagccaagcggaggcaagtgcagagtcttgggggaacaaaccattcatctgctggcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatagccaagcggaggcaagtgcagagtcttgggggaacaaaccattcatctgctggcag 260
Query: 61 tcattgccagttttgcaactgtttctgccacaagacatcgctgagctgagctgggggggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcattgccagttttgcaactgtttctgccacaagacatcgctgagctgagctgggggggg 320
Query: 121 g--tagtctaagctacacttgaatctttgacttttggggcattcaaagccacagaataaa 178
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggtagtctaagctacacttgaatctttgacttttggggcattcaaagccacagaataaa 380
Query: 179 cccattccctggggacagaggatgcctcaaggagagactgaatcaatgtgtcctctcaat 238
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 cccattccctggggacagaggatgcctcaaggagagaccgaatcaatgtgtcctctcaat 440
Query: 239 acaggggaaagattatgccacaggtggtacttaataagaaagactaaaaggagcactgca 298
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaggggaaagatgaagccacaggtggtacttaataagaaagactaaaaggagcactgca 500
Query: 299 ggagggggtgaggcccatgccctgcacacctctccataaggcacgtatgaaccacacagc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggagggggtgaggcccatgccctgcacacctctccataaggcacgtatgaaccacacagc 560
Query: 359 aaccttggagactaaccaagctgcttcgtgctcagcacataccagggcctgctgtgcctg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaccttggagactaaccaagctgcttcgtgctcagcacataccagggcctgctgtgcctg 620
Query: 419 aatcactaggtgtgagcctgatgac 443
|||||||||||||||||||||||||
Sbjct: 621 aatcactaggtgtgagcctgatgac 645
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 845
Length adjustment: 10
Effective length of query: 433
Effective length of database: 835
Effective search space: 361555
Effective search space used: 361555
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
