Query= MSMg01no431_i14.b1 MSMg01no431_i14.b1 CHROMAT_FILE:
MSMg01no431_i14.b1 PHD_FILE: MSMg01no431_i14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:53 2005
(419 letters)
>mm_chr7_129447012_129447831
Length = 820
Score = 789 bits (408), Expect = 0.0
Identities = 417/420 (99%), Gaps = 1/420 (0%)
Strand = Plus / Minus
Query: 1 tcctctgcagagtcccacctcagggacctgacccaccttgatgctggcacactgtgtgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcctctgcagagtcccacctcagggacctgacccaccttgatgctggcacactgtgtgca 561
Query: 61 ccacccctcccgactgctctgtgcacccctacacacctcccctccctccgggaaggttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ccacccctcccgactgctctgtgcacccctacacacctcccctccctccgggaaggttct 501
Query: 121 gcttataaaaaacttctttcacagcccacgttacccccataagcagttccttctctttgc 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gcttataaaaaacttctttcatagcccacgttacccccataagcagttccttctctttgc 441
Query: 181 aatctctggacacctcttgtcacagcaatctgacacttaaccccagcagaagttcaggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aatctctggacacctcttgtcacagcaatctgacacttaaccccagcagaagttcaggcc 381
Query: 241 aggctggtctat-aaaaccactcattccaattgtaaagatgtgatacactatacttaaca 299
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aggctggtctaccaaaaccactcattccaattgtaaagatgtgatacactatacttaaca 321
Query: 300 ttcaatttggggaaaaaaggaacttgtctgtgatatgttaatgttcaaggaagatgacca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttcaatttggggaaaaaaggaacttgtctgtgatatgttaatgttcaaggaagatgacca 261
Query: 360 aaataatcttggggtagtgtgttagagtgagagggaaattctaattatgaggaattcaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaataatcttggggtagtgtgttagagtgagagggaaattctaattatgaggaattcaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 820
Length adjustment: 9
Effective length of query: 410
Effective length of database: 811
Effective search space: 332510
Effective search space used: 332510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_i14.g1 MSMg01no431_i14.g1 CHROMAT_FILE:
MSMg01no431_i14.g1 PHD_FILE: MSMg01no431_i14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:53 2005
(377 letters)
>mm_chr7_129301316_129302092
Length = 777
Score = 656 bits (339), Expect = 0.0
Identities = 366/375 (97%), Gaps = 2/375 (0%)
Strand = Plus / Plus
Query: 1 agaggcctgcctgcctgttttccccagcactgggattgaaggtgcatgcccactcctggc 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 agaggcctgcctgcctgttttccccagcactgggattgagggtgcatgcccactcctggc 260
Query: 61 aagcttaagtttttggagacaaagctctgccttattcagaaagtacagtcgtttcccag- 119
||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 261 aagcttaagtttttggagacaaagctctgccttattcagaaagtacaatcgttacccaga 320
Query: 120 gcactgggaaagacagcagcactgccattttttgctcaatccagcaattggatcttgcta 179
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 g-actgggaaagacagcagcactgccattttttgctcaatccagcaattggatcttgcta 379
Query: 180 agaccctcctgggggaactagagcaacaacagcttctaacggaaggtatcacttaagtgc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agaccctcctgggggaactagagcaacaacagcttctaacggaaggtatcacttaagtgc 439
Query: 240 ccagataggttgttgggcaaagagggtgtctgggaacagtgaccagagctggccgttttt 299
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ccagataggcaggggggcaaagagggtgtctgggaacagtgaccagagctggccgttttt 499
Query: 300 ttctatgaaaagccacacgcctgctctgtgtggccactctttttacatgttgtaaatcca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttctatgaaaagccacacgcctgctctgtgtggccactctttttacatgttgtaaatcca 559
Query: 360 ttttttttttttttt 374
|||||||||||||||
Sbjct: 560 ttttttttttttttt 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
