XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCGT
TGAAAATCTCCATCCAATATCTGGCAAAAACATGATTAAACCCCCTATCC
GCTTGTTTCAGGGTCCATAAACCTAGTTACAGATTTCAAACTACTCCCCA
GAGGGGACAGACTGGGGCTTGAACTGTTGTCCTAGATGTGCAGGTCTACC
AGTTGCGAACTGGAGATCTTTTATCCCAATTAAACAGGGTGGGTGGGTGG
TCACTTACCAGCTTTGGTTCATATAGTCATGGTAGAGGAGGGAATACAGA
CCCAGAATCATATTTTTCTTTTGGTTTAATACAATATAAAGTAAGATATC
CCAATGTTGACCAAACAGCTTGTGACCTAACTCCTAAGTGGGATGTCAGT
CCTTTAAGTGCACATTTGAGCTGGAGCCGAAGGCTGTTACTCTGCCCTTT
CTCTCCCACTCAGATAGGTGGTTGTACTGGCCATTATCCAGAAAGTTTTG
GTTCCATTTTCACGATCTGTGTGTGAACTATCACAGTCAGTGGGGACTAG
TGGAGAGCCTTATGCTAGAGACCAGGGTGTTTCTGGGAGAGGAAAAGGAA
GGCTTCTACTAGACACTAAAAGGTTGAGCCGGGAGCCTGGGCTTGTGTGT
TTTGTGTATACTGCACTATCTCTCCTCCCGTTAAATCCTTCCCCTAGTGA
TCCCTTTATACCCCTCCTCCTCGTCCGTATCTCCCGAG

AGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCTGATCTTTCCAAAACTTTTATCATGAATGGG
TGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAACGAGATGATCATGTG
GTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACATTGATGGATTTTC
GTATATTAAACCATCCCTGCATCCATGGAATAAAACCTACTTGGTCAGGA
TGGATGGTTGCTTTAATGTGTTCTTGGATTCGGTTAGCGAGAATTTTATT
GAGGATTTTTGCATCTATATTCTTAAGAGAAATTGGTCTGAAGTTCTCTA
TCTTTGTTGGGTCTTTCTGTGGTTTAGGTATCAGAGTAATAGTGGCTTCA
TAAAATGAGTTGGGTAGAGTATCTTCTACTTCTATTTTGTGAAATAGTTT
GTGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCAC
TAAACCCATCTGGTCCTGGGCTTTTTTTGGTTGGGAGACTATTAATAACT
GCTTCTATTTCTTTAGGTGATATGTGATTGTTTATATGATCAACTTTGTC
CTTGCTCCATTTTTGGTTCTTGCTACTTCCTCCGAAAATTTGTCCTTTTC
CTCCTGTTTTTCCTAGTTTTGTTTTCTTATATCCCTTTCCACCTATTTCT
CCTTTTTCCCCCTTTTTCCCCTTTCCCTTCCTCCCTTTTACTCCTCTTCT
TTTTT

Query= MSMg01no431_k07.b1 MSMg01no431_k07.b1 CHROMAT_FILE:
MSMg01no431_k07.b1 PHD_FILE: MSMg01no431_k07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:03 2005
         (488 letters)



>mm_chr7_103305612_103306499
          Length = 888

 Score =  928 bits (480), Expect = 0.0
 Identities = 486/488 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccaatatctggcaaaaacatgattaaaccccctatccgcttgtttcagggtccataaacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 ccaatatctggcaaaaacatgattaaaccccctatccgcttgtttcagggtccataaacc 629

                                                                       
Query: 61  tagttacagatttcaaactactccccagaggggacagactggggcttgaactgttgtcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tagttacagatttcaaactactccccagaggggacagactggggcttgaactgttgtcct 569

                                                                       
Query: 121 agatgtgcaggtctaccagttgcgaactggagatcttttatcccaattaaacagggtggg 180
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 agatgtgcaggtataccagttgcgaactggagatcttttatcccaattaaacagggtggg 509

                                                                       
Query: 181 tgggtggtcacttaccagctttggttcatatagtcatggtagaggagggaatacagaccc 240
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tgggtggtcacttaccagatttggttcatatagtcatggtagaggagggaatacagaccc 449

                                                                       
Query: 241 agaatcatatttttcttttggtttaatacaatataaagtaagatatcccaatgttgacca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 agaatcatatttttcttttggtttaatacaatataaagtaagatatcccaatgttgacca 389

                                                                       
Query: 301 aacagcttgtgacctaactcctaagtgggatgtcagtcctttaagtgcacatttgagctg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aacagcttgtgacctaactcctaagtgggatgtcagtcctttaagtgcacatttgagctg 329

                                                                       
Query: 361 gagccgaaggctgttactctgccctttctctcccactcagataggtggttgtactggcca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gagccgaaggctgttactctgccctttctctcccactcagataggtggttgtactggcca 269

                                                                       
Query: 421 ttatccagaaagttttggttccattttcacgatctgtgtgtgaactatcacagtcagtgg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttatccagaaagttttggttccattttcacgatctgtgtgtgaactatcacagtcagtgg 209

                   
Query: 481 ggactagt 488
           ||||||||
Sbjct: 208 ggactagt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space:   419684
Effective search space used:   419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)