Query= MSMg01no433_e12.b1 MSMg01no433_e12.b1 CHROMAT_FILE:
MSMg01no433_e12.b1 PHD_FILE: MSMg01no433_e12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:20 2005
(240 letters)
>mm_chr7_90157762_90158401
Length = 640
Score = 431 bits (223), Expect = e-125
Identities = 234/238 (98%)
Strand = Plus / Minus
Query: 1 atttaatatggngaaggctttgtgtgttcctgtagtctgcatcatcatgaaagtatacac 60
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 438 atttaatatggtgaaggctttgtgtgttcctgtagtctgcattatcatgaaagtatacac 379
Query: 61 actggagaaaaattctgtgaatgtaagtaatggggtaaagcctttgggttatgaggttcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 actggagaaaaattctgtgaatgtaagtaatggggtaaagcctttgggttatgaggttcg 319
Query: 121 ctgagatccaccacaactcaacaccaaattaatgcagctgacaataattattgttttcaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 318 ctgagatccaccacaactcaacaccaaattaatgcagctgacaataattattgtaatcaa 259
Query: 181 gatgctactaatcgatcaaggtcacagaacatagtgagtagctgaactataatacctt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gatgctactaatcgatcaaggtcacagaacatagtgagtagctgaactataatacctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no433_e12.g1 MSMg01no433_e12.g1 CHROMAT_FILE:
MSMg01no433_e12.g1 PHD_FILE: MSMg01no433_e12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:20 2005
(353 letters)
>mm_chr7_89992502_89993254
Length = 753
Score = 632 bits (327), Expect = 0.0
Identities = 345/353 (97%), Gaps = 4/353 (1%)
Strand = Plus / Plus
Query: 1 aggctgtcaggcttagtgacaagcatctttgccagccaaaccatcttaatggccccggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 aggctgtcaggcttagtgacaagcatctttgccagccaaaccatcttaatggccccggat 264
Query: 61 tctcgttttatgtagatatacaaaatcatgaacacacacacacacacacacacacacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctcgttttatgtagatatacaaaatcatgaacacacacacacacacacacacacacaca 324
Query: 121 cacacacacacacaggacatgaaagtagaagagaaactaagtagggaacaaaggagacta 180
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cacacacaca----ggacatgaaagtagaagagaaactaagtagggaacaaaggagacta 380
Query: 181 aacgtggcgagggaagtaagagagaagtttgggcatggggaaagaaatgagcatagtgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacgtggcgagggaagtaagagagaagtttgggcatggggaaagaaatgagcatagtgta 440
Query: 241 ttatatatcaatatgaatatgcccttgtataacacgattccatgtgtgatgcgtaaaagc 300
| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 taatatatcaatatgaatatgcccttgtataacacgattccatgtgtgatgggtaaaagt 500
Query: 301 gaaaaggtaaaggaataaaaagattatttcagcactcactgaacatcttgcca 353
||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 gaaaaggtaaaggaataaaaagattatttcagcactcactgaagatcttgcca 553
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
