Query= MSMg01no433_p11.b1 MSMg01no433_p11.b1 CHROMAT_FILE:
MSMg01no433_p11.b1 PHD_FILE: MSMg01no433_p11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:13 2005
(347 letters)
>mm_chr7_60398430_60399176
Length = 747
Score = 516 bits (267), Expect = e-151
Identities = 313/335 (93%), Gaps = 14/335 (4%)
Strand = Plus / Minus
Query: 1 caactcaactctgcaggctatatcaggacagacatagcttggaaggaattagtggggagg 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 528 caactcaactctgcaggctatatcaggacagacatagcttagaaggaattagtggggagg 469
Query: 61 atttcaagtcttggggcactgaagcttaccaggggaagtaggatgttcttggggtcatga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 468 atttcaagtcttggggcactgaagcttaccaggggaagtaggatgttcttggcgtcatga 409
Query: 121 aagtctcctcaggaaaaa-aggaagaatcctgagttagacaatggttttggagtgggaga 179
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 408 aagtctcctcaggaaaaacaagaagaatcctgagttagacaatggttttggagtgggaga 349
Query: 180 gcttgcacaactcacttcttcaagctgccacagacacatttttatgtatgctagtgtagt 239
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 348 gcttgcacaactcacttcttcaagctgccacagacaaatttttatgtatgctagtc-agt 290
Query: 240 aagaatttctttttta------gacacataaaaattgatcatgtactataatctgtgctt 293
||||||||| | ||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 289 aagaatttc------aaaaagagacacataaaaatggatcaagtactatcatctgtgctt 236
Query: 294 tagtgattaactaaaacctgttgaatgtagttttt 328
|||||||||||||||||||||||||||||||||||
Sbjct: 235 tagtgattaactaaaacctgttgaatgtagttttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_p11.g1 MSMg01no433_p11.g1 CHROMAT_FILE:
MSMg01no433_p11.g1 PHD_FILE: MSMg01no433_p11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:13 2005
(459 letters)
>mm_chr7_60320062_60320918
Length = 857
Score = 841 bits (435), Expect = 0.0
Identities = 453/459 (98%), Gaps = 2/459 (0%)
Strand = Plus / Plus
Query: 1 tttctgcctcccagatgtcatactttctattctaccctttcctataggtcatagcttttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttctgcctcccagatgtcatactttctattctaccctttcctataggtcatagcttttc 260
Query: 61 taattgacaggtgatacatccatataatacacaagggattctctctacagattagtttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taattgacaggtgatacatccatataatacacaagggattctctctacagattagtttct 320
Query: 121 ttctttcttcaggggatctgagcagaggtttaagtaatgacgcctgcactgaaaaatcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctttcttcaggggatctgagcagaggtttaagtaatgacgcctgcactgaaaaatcta 380
Query: 181 ggaaaaatggggaaggtaagcagatgtattttaataagttacaaattttgacaaaacaca 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaaaaatggagaaggtaagcagatgtattttaataagttacaaattttgacaaaacaca 440
Query: 241 ttttgaatgcagtgttataaaattaaagatgtcttcttaaaaaaaataccccaaacttgc 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 ttttgaatgcagtgttataaaattaaagatgtcttcttaaaaaaa-taccccaaacttgc 499
Query: 301 cagcaaaaataaatatccgatcccaatctaacttttcttggtgatccttttaatactcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cagcaaaaataaatatccgatcccaatctaacttttcttggtgatccttttaatactcca 559
Query: 361 taagtaagtacttcgaagcctgtttttattattattttttgactagattgttaaaatagg 420
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 560 taaataagtacttcgaagcctgtttttattatt-ttttttgactagattgttaaaatagg 618
Query: 421 ctttccccactgattctccataaataagattttcgttgg 459
|||||| |||||||||||||||||||||||||| |||||
Sbjct: 619 ctttcctcactgattctccataaataagatttttgttgg 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 857
Length adjustment: 10
Effective length of query: 449
Effective length of database: 847
Effective search space: 380303
Effective search space used: 380303
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
