Query= MSMg01no436_b16.b1 MSMg01no436_b16.b1 CHROMAT_FILE:
MSMg01no436_b16.b1 PHD_FILE: MSMg01no436_b16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:05 2005
(474 letters)
>mm_chr7_13578207_13579081
Length = 875
Score = 855 bits (442), Expect = 0.0
Identities = 464/474 (97%), Gaps = 7/474 (1%)
Strand = Plus / Minus
Query: 5 gaattcaggacaagtgctctactaatgagtcacaccccccaacccctctctgggagattt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 gaattcaggacaagtgctctactaatgagtcacaccccccaacccctctctgggagattt 728
Query: 65 taggaaaaagctttacgactgagccaaactcatagcacctaactggtgaatttgaatttg 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 taggaaaaagctttacaactgagccaaactcatagcacctaactggtgaatttgaatttg 668
Query: 125 catttgaaataccacaaccaggtaatcacatagcttctcacggcaacatggaacattatc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 catttgaaataccacaaccaggtaatcacatagcttctcacggcaacatggaacattatc 608
Query: 185 atcttttttttttt-cccgtaccaggagccacctgtgtcctggcccccaagttctctgcc 243
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 atctttttttttttccccgtaccaggagccacctgtgtcctggcccccaagttctctgcc 548
Query: 244 tcccgattctgggctgagtgccggcagcatggcgtaacagtgatcttgtatgtgggtgaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tcccgattctgggctgagtgccggcagcatggcgtaacagtgatcttgtatgtgggtgaa 488
Query: 304 atcctgcggtacttgtgtaacgtccctgaggtgaggctctaaaatgaactctccaaagtg 363
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 487 atcctgcggtacttgtgtaacgtccctgaggtaaggctctaaaatgaactctccaaagtg 428
Query: 364 aaactcatagatctgcagccccagatgacttctcaaagtt---atcagataaagactttg 420
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 427 aaactcataggtctgcagccccagatgacttctcaaagttatcatcagataaagactttg 368
Query: 421 gtaaggagtgaagaagacattgattcagaaatagaacataggcctagcacgtgc 474
||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gtaaggagt---gaagacattgattcagaaatagaacataggcctagcacgtgc 317
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 875
Length adjustment: 10
Effective length of query: 464
Effective length of database: 865
Effective search space: 401360
Effective search space used: 401360
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_b16.g1 MSMg01no436_b16.g1 CHROMAT_FILE:
MSMg01no436_b16.g1 PHD_FILE: MSMg01no436_b16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:05 2005
(435 letters)
>mm_chr7_13395463_13396297
Length = 835
Score = 835 bits (432), Expect = 0.0
Identities = 434/435 (99%)
Strand = Plus / Plus
Query: 1 tctggtgccggataagtccagcaatgttcctgaagagtttacgacactggttacaaccgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctggtgccggataagtccagcaatgttcctgaagagtttacgacactggttacaaccgt 260
Query: 61 acggcttctcaccagtgtggaccctctgatgcctgatgagatatgcactctcaatgaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acggcttctcaccagtgtggaccctctgatgcctgatgagatatgcactctcaatgaaag 320
Query: 121 ttttcccacactctttacattcatagggcttctccccagaatgaattttctgatgcacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttcccacactctttacattcatagggcttctccccagaatgaattttctgatgcacaa 380
Query: 181 tgaggtgagagttgcgactgaaggatttcccacactctacacattcaaaaggcttctctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaggtgagagttgcgactgaaggatttcccacactctacacattcaaaaggcttctctc 440
Query: 241 cagtgtgtgtcctctcatgctgagtgaggtatgagccatctcggaaagcctttccacatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagtgtgtgtcctctcatgctgagtgaggtatgagccatctcggaaagcctttccacatc 500
Query: 301 tgctacactcatagggcttctctccagtgtggattctgagatgcacagtaaggtgagaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgctacactcatagggcttctctccagtgtggattctgagatgcacagtaaggtgagaaa 560
Query: 361 tgtcagtgaagggcttcccacattcattacatctatatggnttttcccctgtatgagttc 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 561 tgtcagtgaagggcttcccacattcattacatctatatggtttttcccctgtatgagttc 620
Query: 421 tttgatgcaaaatca 435
|||||||||||||||
Sbjct: 621 tttgatgcaaaatca 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
