Query= MSMg01no437_k13.b1 MSMg01no437_k13.b1 CHROMAT_FILE:
MSMg01no437_k13.b1 PHD_FILE: MSMg01no437_k13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:07 2005
(214 letters)
>mm_chr7_74287793_74288406
Length = 614
Score = 352 bits (182), Expect = e-102
Identities = 194/198 (97%), Gaps = 1/198 (0%)
Strand = Plus / Minus
Query: 1 tctactctgactgtactttgatctgagcctgcccctagcctaaaagccacacagcttatc 60
|||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||
Sbjct: 381 tctactctgactgtactttgatttgaacctgcccctagcctaagagccacacagcttatc 322
Query: 61 tctctgcagggagtctttggggcagatgtttatcatttcagggagtggctggtgggaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctctgcagggagtctttggggcagatgtttatcatttcagggagtggctggtgggaaat 262
Query: 121 gggcctgcaggaccctacaggagtctgtgatattataggtctcaacaaacattagaactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggcctgcaggaccctacaggagtctgtgatattataggtctcaacaaacattagaactg 202
Query: 181 cttttttttttttctttt 198
||||||||||||| ||||
Sbjct: 201 ctttttttttttt-tttt 185
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 614
Length adjustment: 9
Effective length of query: 205
Effective length of database: 605
Effective search space: 124025
Effective search space used: 124025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no437_k13.g1 MSMg01no437_k13.g1 CHROMAT_FILE:
MSMg01no437_k13.g1 PHD_FILE: MSMg01no437_k13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:07 2005
(535 letters)
>mm_chr7_74168135_74169069
Length = 935
Score = 973 bits (503), Expect = 0.0
Identities = 531/543 (97%), Gaps = 10/543 (1%)
Strand = Plus / Plus
Query: 1 tgacagccagggttacacagagaaaccctgtctcgaaaaac----caaaaaa-aaa-aaa 54
||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||
Sbjct: 195 tgacagccagggttacacagagaaaccctgtctcgaaaaacaaaacaaaaaacaaacaaa 254
Query: 55 --aaaaaaaagtgtcttggatggcctgggagagatggctcagaggttaagagcactgact 112
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 255 caaaaaaaaagtgtcttg-atggcctgg-agagatggctcagaggttaagagcactgact 312
Query: 113 gctcttctagaagtcttgagttcaattcccagcaaccacatggtggctcacaaccatctg 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gctcttctagaagtcttgagttcaattcccagcaaccacatggtggctcacaaccatctg 372
Query: 173 taatggaatttgatgccctcttccattgtgtctgaagacagctactgtgtactcatatac 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 taatggaatttgatgccctcttccattgtgtctgaagacagctactgtgtactcatatac 432
Query: 233 ataaaataaataaatatgtcttttaaaaagatgagtcttgacatgcttgttttaagctgg 292
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ataaaataaataaataagtcttttaaaaagatgagtcttgacatgcttgttttaagctgg 492
Query: 293 aacttttcttatcaattctgttatttacatctcttgtatcaattattacatgactgttga 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aacttttcttatcaattctgttatttacatctcttgtatcaattattacatgactgttga 552
Query: 353 atttttcatgggctaagaaagaccattaaattattatactaatttcttttttgttgctta 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 atttttcatgggctaagaaagaccattaaattattatactaatttcttttttgttgctta 612
Query: 413 cccttatatcccaagtcagttttgtttaatgaaatttaatactatgtactttttggggca 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 cccttatatcccaagtcagttttgtttaatgaaatttaatactatgtactttttggggca 672
Query: 473 tagatactacatggccatcgagggtcataaatccttatattatttcatgcctcaggctca 532
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 673 tagatactacatggccatcgagggtcatatatccttatattatttcatgcctcaggctca 732
Query: 533 ggg 535
|||
Sbjct: 733 ggg 735
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space: 485625
Effective search space used: 485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
