Query= MSMg01no438_j18.b1 MSMg01no438_j18.b1 CHROMAT_FILE:
MSMg01no438_j18.b1 PHD_FILE: MSMg01no438_j18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:27 2005
(555 letters)
>mm_chr7_87802696_87803647
Length = 952
Score = 996 bits (515), Expect = 0.0
Identities = 541/551 (98%), Gaps = 3/551 (0%)
Strand = Plus / Minus
Query: 5 ggaattcttttagattctctctgtttataactttttccagctttctttttggtttctttc 64
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 ggaattcttttagatactttctgtttataactttttccagctttctttttggtttctttc 693
Query: 65 taattaacttgggaggaattctttgaatagtagagatctgtgctgtcttacaaatagtct 124
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 692 taattaacttgggaggaattctttgaatagtagagatctgtgctgttttacaaatagtct 633
Query: 125 ttctcatactccctcactgtttaatgatgtttttgttaatatcttttcttcatgttgtta 184
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 632 ttctcatactccctcactgtttaatgatgtttttgttaatatcttctcttcatgttgtta 573
Query: 185 aaggtccagtgttggttgatactcaagtcaatgagaatacagattcattcactcagcaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aaggtccagtgttggttgatactcaagtcaatgagaatacagattcattcactcagcaaa 513
Query: 245 tatttccttaaagccggaccatttgggggtgcctattcagctaggacagccctaaaccct 304
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tatttccttaaagccggatcatttgggggtgcctattcagctaggacagccctaaaccct 453
Query: 305 gactttcagtctgtgccactgataatggcccttcacgctggcttgagcggattcctgaaa 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gactttcagtctgtgccactgataatggcccttcacgctggcttgagcggattcctg--- 396
Query: 365 aaaaaaaatgttttctcagaggcaaggagacccaaacatttcccagattttggccacata 424
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aaaaagaatgttttctcagaggcaaggagacccaaacatttcccagattttggccacata 336
Query: 425 atcagaaatttcaaaagagttctggaatttatgggctggcctccaagttatcaggcatct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 atcagaaatttcaaaagagttctggaatttatgggctggcctccaagttatcaggcatct 276
Query: 485 gtcatcttctccgagggcagtttactctgagctcagtccaccctcctccctcagctgtgc 544
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gtcgtcttctccgagggcagtttactctgagctcagtccaccctcctccctcagctgtgc 216
Query: 545 agagcaaatgg 555
|||||||||||
Sbjct: 215 agagcaaatgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 952
Length adjustment: 10
Effective length of query: 545
Effective length of database: 942
Effective search space: 513390
Effective search space used: 513390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_j18.g1 MSMg01no438_j18.g1 CHROMAT_FILE:
MSMg01no438_j18.g1 PHD_FILE: MSMg01no438_j18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:27 2005
(249 letters)
>mm_chr7_87641176_87641824
Length = 649
Score = 480 bits (248), Expect = e-140
Identities = 248/248 (100%)
Strand = Plus / Plus
Query: 1 aaggcagccttgccatccggcaaatctgaagctagcctgtgctatggcaagatgcttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggcagccttgccatccggcaaatctgaagctagcctgtgctatggcaagatgcttctg 260
Query: 61 tgtcaagaaaaactacaaaaggctctccactgttccattttctatgtttcatctcctcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtcaagaaaaactacaaaaggctctccactgttccattttctatgtttcatctcctcta 320
Query: 121 tctgtaaaaaagaccatgttgtctgtgtgtgtaactggagctggccccaaatttgcttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgtaaaaaagaccatgttgtctgtgtgtgtaactggagctggccccaaatttgcttgt 380
Query: 181 atgccaggcttgcttctaactgacagagaggaacctctttttgcctctgaaagtgctgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgccaggcttgcttctaactgacagagaggaacctctttttgcctctgaaagtgctgag 440
Query: 241 gcttaaag 248
||||||||
Sbjct: 441 gcttaaag 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
