Query= MSMg01no442_d08.b1 MSMg01no442_d08.b1 CHROMAT_FILE:
MSMg01no442_d08.b1 PHD_FILE: MSMg01no442_d08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:16 2005
(428 letters)
>mm_chr7_142575633_142576460
Length = 828
Score = 746 bits (386), Expect = 0.0
Identities = 420/436 (96%), Gaps = 9/436 (2%)
Strand = Plus / Plus
Query: 1 tttccttctcttttctctttagtgtatctccactggcccatactgcttggaaattatgtg 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 tttccttctcttttctctttagtgtatctccactggcccaaactgcttggaaattatgtg 260
Query: 61 aaaaccagaacacatctattccccagcttagctgggagtatac--------caaggaagc 112
||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 aaaaccagaacacatctattccccagcttagctgggagtatacagtgttaccaaggaagc 320
Query: 113 tgtatctaataaccacaccaataaaaatacagttagataggatcagaagtgaggaggaca 172
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 tgtatctaataaccacaccaataaaaatacagttagataggattagaagtgaggaggaca 380
Query: 173 catttatcccaacactgggagaaactgggaccagcaggacccaggcacccaggaacccca 232
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 catttatcccaacactgggagaaactgggaccagcgggacccaggcacccaggaacccca 440
Query: 233 cctgacagtgaaattggttctcttccagtctgagcaggtgccctgagcagaccttgggtg 292
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctgacagtgaaattggttc-cttccagtctgagcaggtgccctgagcagaccttgggtg 499
Query: 293 tgaactctgcagccagtcccacaacacctagaggaagttccactcccaggcactccaata 352
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||
Sbjct: 500 tgaactctgcagccagtcccacaacacctacaggaagttccactcccaggcgctctaata 559
Query: 353 cacccagaatcaccggatcacaggattccaggagcttgctcacaccaggatctcagggtc 412
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cacccagaatcacaggatcacaggattccaggagcttgctcacaccaggatctcagggtc 619
Query: 413 ccagaggcagcttgac 428
||||||||||||||||
Sbjct: 620 ccagaggcagcttgac 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no442_d08.g1 MSMg01no442_d08.g1 CHROMAT_FILE:
MSMg01no442_d08.g1 PHD_FILE: MSMg01no442_d08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:16 2005
(244 letters)
>mm_chr7_142724603_142725246
Length = 644
Score = 445 bits (230), Expect = e-129
Identities = 239/242 (98%)
Strand = Plus / Minus
Query: 2 aataaacagaaagttgatcctagtctgggtcctcacaatatgctaattttgagtttcttt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aataaacagaaagttgatcctagtctgggtcctcacaatatgctaattttgagtttcttt 317
Query: 62 ttactgatgaaccatatgcatgcaatgtgcagatcctatgaacacagtgcagtgaataga 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ttactgatgaaccatatgcatgcaatgtgcagatcctatgaacacagtgcagtgaataga 257
Query: 122 gccatgcacgttagtaataggcatgcccttactgagatactgacattttagataatgtta 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 256 gccatgcacgttagtaataggcatgcccttactgagatactgacattttagataagggga 197
Query: 182 aatcgctcagctggtagagagcctgtccccacaagtatgaggacctgagttgactcacca 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 aatcgctcagctggtagagagcctgtccccacaagtatgaggacctgagttgactcacca 137
Query: 242 cc 243
||
Sbjct: 136 cc 135
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
