Query= MSMg01no448_p06.b1 MSMg01no448_p06.b1 CHROMAT_FILE:
MSMg01no448_p06.b1 PHD_FILE: MSMg01no448_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:24 2005
(144 letters)
>mm_chr7_98707772_98708315
Length = 544
Score = 271 bits (140), Expect = 1e-77
Identities = 143/144 (99%)
Strand = Plus / Plus
Query: 1 aaaatttagtacctggcatggttctgcttcctggctcatagcccgctgtttaccaaggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaatttagtacctggcatggttctgcttcctggctcatagcccgctgtttaccaaggta 260
Query: 61 actttatacagtagagggagaagagcaatctctaggatctgtattttaaaggccatgata 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 actttatacagtagagggagaagagcaatctctaggatctgtatattaaaggccatgata 320
Query: 121 tcattcataatgatactgctgtta 144
||||||||||||||||||||||||
Sbjct: 321 tcattcataatgatactgctgtta 344
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 544
Length adjustment: 8
Effective length of query: 136
Effective length of database: 536
Effective search space: 72896
Effective search space used: 72896
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no448_p06.g1 MSMg01no448_p06.g1 CHROMAT_FILE:
MSMg01no448_p06.g1 PHD_FILE: MSMg01no448_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:24 2005
(400 letters)
>mm_chr7_98884019_98884818
Length = 800
Score = 692 bits (358), Expect = 0.0
Identities = 388/400 (97%), Gaps = 5/400 (1%)
Strand = Plus / Minus
Query: 1 cttactaaatgggttcctatcctgagaaaagtagaagctctttctagcaaaattccatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 cttactaaatgggttcctatcctgagaaaagtagaagctctttctagcaaaattccatac 452
Query: 61 agcaatagggtatgtaagcaagctttgttttgaagttaaaaggctgactgtacagggagg 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aacaatagggtatgtaagcaagctttgttttgaagttaaaaggctgactgtacagggagg 392
Query: 121 cggcagagaaacacaaagggcatcaagaaagtggctgaaaagcctttaagcagtagttag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 391 cggcagagaaacacaaagggcatcaagaaagtggctgaaaagcctttaagcaatagtcag 332
Query: 181 gatatttagggttatttctattgcacagaatacttcaatgagttaattaacctccttaag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aatatttagggttatttctattgcacagaatacttcaatgagttaattaacctccttaag 272
Query: 241 actcaaattttcaatatgcacctccccccaggtgaaggagctatagattttttgtttttg 300
||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 271 actcagtttttcaatatgcaccttcccccaggtgaaggagctatagattttttgtttttg 212
Query: 301 ttttgattttggtttgtttgtaattattttatttatttacatttcaagtgtatcccttct 360
||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ttttg-tttt----tgtttgtaattattttatttatttacatttcaagtgtatcccttct 157
Query: 361 cagtacccccatcatgagactccatcccacattccataag 400
||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 cagtacccccatcatgagactccatcccacattccataag 117
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
