Query= MSMg01no449_k24.b1 MSMg01no449_k24.b1 CHROMAT_FILE:
MSMg01no449_k24.b1 PHD_FILE: MSMg01no449_k24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:22 2005
(432 letters)
>mm_chr7_90520593_90521424
Length = 832
Score = 758 bits (392), Expect = 0.0
Identities = 429/456 (94%), Gaps = 24/456 (5%)
Strand = Plus / Plus
Query: 1 gagcaatagctgaagtttcttagggaagaaatagttctgtctttagactgcagcagagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 gagcaatagctgaagtttcttagggaagaaatagttctgtctttagactgcagcagagaa 236
Query: 61 ttctgcctgggcttccatccttctccattgtttgtgggatggaagacttgctatcccaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ttctgcctgggcttccatccttctccattgtttgtgggatggaagacttgctatcccaac 296
Query: 121 aatgggctccctccctccctccctccatccctcc------ctt----------------- 157
|||||||||||||||||||||||||| ||||||| |||
Sbjct: 297 aatgggctccctccctccctccctccctccctccctccctctttccctccctccctccct 356
Query: 158 -cctccctccctccctccctctagcactcttgccctccctctttctctcctctatctgag 216
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 357 ccctccctccctccctccctctagcactcttgccctccctctttctgtcctctatctgag 416
Query: 217 ccctgcacttttgtttattgcttattggcatgaactgcttcccagcatggctgatgaaaa 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ccctgcacttttgtttattgcttattggcatgaactgcttcccagcatggctgatgaaaa 476
Query: 277 aagtgcatacccttatacttaagcagagtgcttactggtgaccttccatgctcctataaa 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 aagtgcatacccttatacttaagcagagtgcttactggtgaccttccatgctcctataaa 536
Query: 337 ggcccccctttttatcaagggactctctgagttgagagggttgccccaactttgcttcta 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 ggcccccctttttatcaagggactctctgagttgagagggttgccccaactttgcttcta 596
Query: 397 tatgaactacttgttgcagtgaccaaatataagaaa 432
||||||| ||||||||||||||||||||||||||||
Sbjct: 597 tatgaaccacttgttgcagtgaccaaatataagaaa 632
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_k24.g1 MSMg01no449_k24.g1 CHROMAT_FILE:
MSMg01no449_k24.g1 PHD_FILE: MSMg01no449_k24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:22 2005
(439 letters)
>mm_chr7_90717222_90718060
Length = 839
Score = 826 bits (427), Expect = 0.0
Identities = 436/439 (99%)
Strand = Plus / Minus
Query: 1 tcctgtgacagggaaagtaatatgcttcagagggtctaggtgctggtagttagaagctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tcctgtgacagggaaagtaatatgcttcagagggtctaggtgctggtagttagaagctgt 580
Query: 61 tatgttttttaaacaatatgagtagagtggacagctaccccttcaggtagaagcggtggg 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 579 tatgttttttaaacaatatgagtagagtggacagctacccctccaggtagaagcggtggg 520
Query: 121 gcctatagtgaataatatttcagtttcacttttcctagagcagcaactaagaaggcaaaa 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 519 gcctatagtgaataatatttcagtttcacttttcctacagcagcaactaagaaggcaaaa 460
Query: 181 cacgtaatggagatgcaggatgacagggctgacctcagcctgggtccctgagagacctaa 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 catgtaatggagatgcaggatgacagggctgacctcagcctgggtccctgagagacctaa 400
Query: 241 gcaaagctctgctgacatttgcacaggccacaagtgaggaagaagactgtactgtaagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gcaaagctctgctgacatttgcacaggccacaagtgaggaagaagactgtactgtaagcc 340
Query: 301 tctcatcggctggagtcatctgcttccactctgtagctgacctaacataccttctgctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tctcatcggctggagtcatctgcttccactctgtagctgacctaacataccttctgctct 280
Query: 361 ctcaatttctgcttcctttcctggctccataatttgctcaagccatctgtctgcttatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ctcaatttctgcttcctttcctggctccataatttgctcaagccatctgtctgcttatgg 220
Query: 421 agccatttgccctcttccg 439
|||||||||||||||||||
Sbjct: 219 agccatttgccctcttccg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
