Query= MSMg01no451_e23.b1 MSMg01no451_e23.b1 CHROMAT_FILE:
MSMg01no451_e23.b1 PHD_FILE: MSMg01no451_e23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:30 2005
(623 letters)
>mm_chr7_128962334_128963359
Length = 1026
Score = 990 bits (512), Expect = 0.0
Identities = 553/568 (97%), Gaps = 5/568 (0%)
Strand = Plus / Minus
Query: 5 gaattcttttgtgtct-aaactaaagtcattactaggcattgaggatgtaatcgtgagcc 63
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 567 gaattcttttgtgtctaaaactaaagtcattactgggcattgaggatgtaatcgtgagcc 508
Query: 64 tgtgtcccttgctcaccactggaagaagccaatgactcaaggaaaaaatattcaggaaag 123
||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||
Sbjct: 507 cgtgtcccttgctcaccactcgaagaagccaatgactcaaggataaactattcaggaaag 448
Query: 124 aaaaaaagatgtacttaataatctagcaagctgaagaagatggcagccatcaccagcaaa 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 -aaaaaagatgtacttaataatctagcaagctgaagaagatggcagccatcaccagcaaa 389
Query: 184 tgccatcgtatctaggggtgcagatgcaaggaccataaaggatgct---gggggggtgaa 240
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 388 tgccatcgtatctaggggtgcagatgcaaggactataaaggatgctggggggggggtgaa 329
Query: 241 ttatacataagcagacaccagggttgttaaaagtttggctggactgattttctgacaagg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 328 ttatacataagcagacaccagggttgttaaaagtttggctggactgattttctgaccagg 269
Query: 301 gcagctgttatccataggtcaccgagtattcttcactctataaatctgaaggaaagttag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gcagctgttatccataggtcaccgagtattcttcactctataaatctgaaggaaagttag 209
Query: 361 tgattaaagctgtgatgctggcacacacctatagtcccaggattgtgaaggctaagacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tgattaaagctgtgatgctggcacacacctatagtcccaggattgtgaaggctaagacag 149
Query: 421 gaggatcaggaggttatgggtagcctgggctacataatgagaacttgtcttaaaaaatgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gaggatcaggaggttatgggtagcctgggctacataatgagaacttgtcttaaaaaatgg 89
Query: 481 ttttaaattcactggttagaaagtcttgaactaagaattacagttttattgttgtatttc 540
|||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 88 ttttcaagtcactggttagaaagtcttgaactaagaattacagttttattgttgtattcc 29
Query: 541 tagggacagttaattattggatacaaca 568
||||||||||||||||||||||||||||
Sbjct: 28 tagggacagttaattattggatacaaca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1026
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1016
Effective search space: 622808
Effective search space used: 622808
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_e23.g1 MSMg01no451_e23.g1 CHROMAT_FILE:
MSMg01no451_e23.g1 PHD_FILE: MSMg01no451_e23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:31 2005
(518 letters)
>mm_chr7_128797976_128798893
Length = 918
Score = 978 bits (506), Expect = 0.0
Identities = 516/520 (99%), Gaps = 2/520 (0%)
Strand = Plus / Plus
Query: 1 tgagagtgatgatgactgacactctcattaggccacttcacttttccaagtatggaacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgagagtgatgatgactgacactctcattaggccacttcacttttccaagtatggaacca 260
Query: 61 cccaggtgaggaattgctgctagctagacaggtcccaaaagagaagcaaaggctccaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccaggtgaggaattgctgctagctagacaggtcccaaaagagaagcaaaggctccaaat 320
Query: 121 gtaggagggagatcgtgcacagctaccagaaccatagagaatgaagtggagacatcatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaggagggagatcgtgcacagctaccagaaccatagagaatgaagtggagacatcatag 380
Query: 181 caagagcactggctgggcagctggtgtcaggcaggcccatgtgggcggaggctgctgttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagagcactggctgggcagctggtgtcaggcaggcccatgtgggcggaggctgctgttc 440
Query: 241 tggagagctgagtaggagcagcactgcacagtggacacacctacctaccaggagactgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggagagctgagtaggagcagcactgcacagtggacacacctacctaccaggagactgag 500
Query: 301 gaaccttgctcagttcagtctgctgcctttcagggtggtctgttcttgattgtggcatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaccttgctcagttcagtctgctgcctttcagggtggtctgttcttgattgtggcatgg 560
Query: 361 aaaggccacacagtaactaactaatatgctaactattttattttattctctgtatagccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 aaaggccacacagtaactaactaatatgctaactattttattttattctctgtatagtcc 620
Query: 421 tggctgtcctggaactcact--gtagaccaggctagcctcaaactcagaaatctgcctgc 478
|||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 621 tggctgtcctggaactcactttgtagaccaggctggcctcaaactcagaaatctgcctgc 680
Query: 479 ctctgcctcccaagtgctggggttaaaggtgtgtgccacc 518
||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctctgcctcccaagtgctggggttaaaggtgtgtgccacc 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
