Query= MSMg01no452_g13.b1 MSMg01no452_g13.b1 CHROMAT_FILE:
MSMg01no452_g13.b1 PHD_FILE: MSMg01no452_g13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:57 2005
(636 letters)
>mm_chr7_68055294_68056331
Length = 1038
Score = 1162 bits (601), Expect = 0.0
Identities = 630/645 (97%), Gaps = 9/645 (1%)
Strand = Plus / Plus
Query: 1 gtataagccaaggagaactattgacagaaatgctaatgaggctacatgacacaattcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 gtataagccaaggagaactattgacagaaatgctaatgaggctacatgacacaattcaag 253
Query: 61 ctctaatgagattgtgtgacaaagttcaagctttcagcagtaagttgtctggctcatgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ctctaatgagattgtgtgacaaagttcaagctttcagcagtaagttgtctggctcatgat 313
Query: 121 gttttcaggaaagttatctataaaacagtttctgttgttaactctttgcttttgtctttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gttttcaggaaagttatctataaaacagtttctgttgttaactctttgcttttgtctttg 373
Query: 181 ttaattctaacaatcttggtgttctaggatgatctgggagtgaggtatagaattgaacaa 240
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ttaattctaataatctcggtgttctaggatgatctgggagtgaggtatagaattgaacaa 433
Query: 241 aattacctggatcaaaaaaaaaa---------aagaagaagaagaatctttgttaataaa 291
||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 434 aattacctggatcaaaaaaaaaaaaaaagaagaagaagaagaagaatctttgttaataaa 493
Query: 292 gtcttcaatcacaaccttgactgcagaaactgggaaagaggcccaagctgtggacctgta 351
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gtcttcaatcacaacattgactgcagaaactgggaaagaggcccaagctgtggacctgta 553
Query: 352 gaaaccctacaaataaaattgggaccatttcctatttttttctaatgataataacagtct 411
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 554 gaaaccctacaaataaaattgggaacatttcctatttttttctaatgataataacagtct 613
Query: 412 gagtaagtttttaaaaggaaacaatatccaaaagaattcaggaagccaagaatcaaagaa 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gagtaagtttttaaaaggaaacaatatccaaaagaattcaggaagccaagaatcaaagaa 673
Query: 472 cctaagtttgaattcctgttgcattttactcaaaaattattggaacagtaaggacagtgc 531
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 674 cctaagtttgaattcctgttgcattttactcaaaaattattggaacagtaaggacagtac 733
Query: 532 cattgtagaatttaacactcctgtcacactatggtaaaaataaatataaataccatatta 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 cattgtagaatttaacactcctgtcacactatggtaaaaataaatataaataccatatta 793
Query: 592 gagagtcttatataagaaatagaataggaaatgagaaaggaaaag 636
||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 794 gagagtcatatataagaaatagaataggaaatgagaaaggaaaag 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1038
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1028
Effective search space: 643528
Effective search space used: 643528
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_g13.g1 MSMg01no452_g13.g1 CHROMAT_FILE:
MSMg01no452_g13.g1 PHD_FILE: MSMg01no452_g13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:57 2005
(520 letters)
>mm_chr7_68215459_68216377
Length = 919
Score = 975 bits (504), Expect = 0.0
Identities = 516/520 (99%), Gaps = 1/520 (0%)
Strand = Plus / Minus
Query: 1 tacatatataaaatctgttatgaaatttattggttacactcttgtactgaaggaaaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tacatatataaaatctgttatgaaatttattggttacactcttgtactgaaggaaaaata 660
Query: 61 aggttccgtttatcaggatgctgattgttttggacgaggggcttgactttataaatgtag 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 659 aggttccgtttatcaggatgctgattgttttggacgaggggcttgactatataaatgtag 600
Query: 121 taatggtcaatcatatatcctccttgtgggatagctcatgtttcccctgtatataccact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 taatggtcaatcatatatcctccttgtgggatagctcatgtttcccctgtatataccact 540
Query: 181 aagctcaaatcctactctctttgaacaaaatattttcatgaaaaattattgtaggaagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 aagctcaaatcctactctctttgaacaaaatattttcatgaaaaattattgtaggaagaa 480
Query: 241 gaaaaagttgaacatctgacacacaaaaggtgtatccaaaactatgtcctaatatttttg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 479 gaaaaagttgaacatctgacacacaaaaggtgtatccaaaactatgtcctaata-ttttg 421
Query: 301 aggtgttttgcttgtgtaagaaactgaaaatacagggttatctgtaggcagacagaaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aggtgttttgcttgtgtaagaaactgaaaatacagggttatctgtaggcagacagaaagt 361
Query: 361 ggtagggtatatgtctggtttcatttccaggcacatagaatttaataattttttgcattt 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ggtagggtatatgtctgctttcatttccaggcacatagaatttaataattttttgcattt 301
Query: 421 tttcaagcaatgggattccccaaatatttccaggaaggtatcattttacttctatttaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tttcaagcaatgggattccccaaatatttccaggaaggtatcattttacttctatttaaa 241
Query: 481 aattgcaactcttgtcaccattatttctttgaaaatgtgt 520
|||||||||||||||||||| |||||||||||||||||||
Sbjct: 240 aattgcaactcttgtcaccactatttctttgaaaatgtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 919
Length adjustment: 10
Effective length of query: 510
Effective length of database: 909
Effective search space: 463590
Effective search space used: 463590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
