Query= MSMg01no453_p20.b1 MSMg01no453_p20.b1 CHROMAT_FILE:
MSMg01no453_p20.b1 PHD_FILE: MSMg01no453_p20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:02 2005
(596 letters)
>mm_chr7_130352742_130353737
Length = 996
Score = 712 bits (368), Expect = 0.0
Identities = 399/414 (96%), Gaps = 10/414 (2%)
Strand = Plus / Minus
Query: 4 ggaattccttgtttcccacctctaactcccaatgccgcacagagatgctggaccagacca 63
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ggaattccttgcttcccacctctaactcccaatgccgcacagagatgctggaccagacca 346
Query: 64 ctggggggactgtagccagtaggaaagaggtctcacactgtgcccatgactttgggccag 123
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 345 ctggggggactgtagccagtaggaaagaggtctcacactgtgcccatgacttggggccag 286
Query: 124 ccacaagatggcttaaccttttgagtgcttgccactctcatcatgtggtactctgggctt 183
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 285 ccacaagatggcttaaccttttgagtgcttgccactctcaccatgtggtactctgggctt 226
Query: 184 ccttaagaatctagtgttccttggggctggagtgacagctcagtgattaagagtactgac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 ccttaagaatctagtgttccttggggctggagtgacagctcagtgattaagagtactgac 166
Query: 244 tggtggcatcccagcacttgggaggcagaggcagaggcaattggatttctgagttccagg 303
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 165 tggtggcatcccagcacttgggaggcagaggcag------ttggatttctgagttccagg 112
Query: 304 ccagcctggtctacagagtgagtacccggacagccagggctacacagagaaaccctgtct 363
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 111 ccagcctggtctacagagtgagttcccggacagccagggctacacagagaaaccctgtct 52
Query: 364 c-aaaaaaaacaaaacaaaacaaaacaaaacaaaacaaaaaacaaagaaacaaa 416
| |||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 51 caaaaaaaaaaaaaacaa---aaaacaaaacaaaacaaaaaacaaagaaacaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_p20.g1 MSMg01no453_p20.g1 CHROMAT_FILE:
MSMg01no453_p20.g1 PHD_FILE: MSMg01no453_p20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:02 2005
(625 letters)
>mm_chr7_130186521_130187544
Length = 1024
Score = 1201 bits (621), Expect = 0.0
Identities = 624/625 (99%), Gaps = 1/625 (0%)
Strand = Plus / Plus
Query: 1 agttagtagaacacagtctgtctcagccctatcatttgcataccattgtttattcgtgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttagtagaacacagtctgtctcagccctatcatttgcataccattgtttattcgtgta 260
Query: 61 aaatttgctttttgttactactatgttgtgttgtgactccgattaacaaaaatagattaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatttgctttttgttactactatgttgtgttgtgactccgattaacaaaaatagattaa 320
Query: 121 tgactaaaatgtggttcactggagtgtaagagcaatgataaaaatagttccagccattgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgactaaaatgtggttcactggagtgtaagagcaatgataaaaatagttccagccattgc 380
Query: 181 tgcagaggcttaatgagagaacaggacttccagatcatctgtggtgcgatgaattcacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcagaggcttaatgagagaacaggacttccagatcatctgtggtgcgatgaattcacca 440
Query: 241 gcgtggctggtggggaaagtgtgaatgggaaaggcggctgtggagatctggaaattggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcgtggctggtggggaaagtgtgaatgggaaaggcggctgtggagatctggaaattggat 500
Query: 301 ttcactgaacaagagattgcctgcaccggatcttccattagcaactttgtcaggttgctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcactgaacaagagattgcctgcaccggatcttccattagcaactttgtcaggttgctg 560
Query: 361 cgtgactcggccagagatttcacatcatttccaaaatggaattacctgggcgaccaacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgtgactcggccagagatttcacatcatttccaaaatggaattacctgggcgaccaacca 620
Query: 421 gtgttcttcagccacatgcaatataaactggggttggatctcagtggtcgagagcttccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgttcttcagccacatgcaatataaactggggttggatctcagtggtcgagagcttccc 680
Query: 481 tgactcatgtgatcacagctgtgggggtctgtccctggacttgaaagaaaaagtgttgag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgactcatgtgatcacagctgtgggggtctgtccctggacttgaaagaaaaagtgttgag 740
Query: 541 ttcctagtttagtaatcactcaactttaaaacacaatttaattaattgagtttatttttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttcctagtttagtaatcactcaactttaaaacacaatttaattaattgagtttatttttt 800
Query: 601 attgcatatttnatttgttttgtgt 625
||||||||||| |||||||||||||
Sbjct: 801 attgcatattt-atttgttttgtgt 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1024
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1014
Effective search space: 623610
Effective search space used: 623610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
