Query= MSMg01no454_p23.b1 MSMg01no454_p23.b1 CHROMAT_FILE:
MSMg01no454_p23.b1 PHD_FILE: MSMg01no454_p23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:22 2005
(397 letters)
>mm_chr7_133467203_133467994
Length = 792
Score = 659 bits (341), Expect = 0.0
Identities = 379/397 (95%), Gaps = 13/397 (3%)
Strand = Plus / Minus
Query: 5 gaattcttttatc----ttgccgggagcaacctgtgtttttccacatttgtttattggtc 60
||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gaattcttttatcacagt----gggagcaacctgtgtttttccacatttgtttattggtc 555
Query: 61 tccggtgctgggctagtggttagcttaagttcatcctgttggggctttcccagttagcct 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 554 tccggtgctgggctagtggttagcttaagttcatcctgttggggcttt-ccagttagcct 496
Query: 121 tggggacatctgtctgtcctttaaaaggagactctctcagcagcatgataaagagggtgg 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 495 tggggacatctgtctgtcctttaaaaggaga--ctctcagcagcatgataaagaggatgg 438
Query: 181 tttcatccggtttctgtgatgtctcatgttgaaatgtcctgtagctttataacgtctgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tttcatccggtttctgtgatgtctcatgttgaaatgtcctgtagctttataacgtctgat 378
Query: 241 tacaccgccctgggctgcatcatctttgaaaatttcttcaaaaaatacatgtacatgtac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tacaccgccctgggctgcatcatctttgaaaatttcttcaaaaaatacatgtacatgtac 318
Query: 301 atctcaggaactctctgcttctaaaactcgctttcagagaggagaccgggtccagaaagg 360
|||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 317 atctcaggaa--ctctgcttctaaaactcgctttcagagagaagacccggtccagaaagg 260
Query: 361 gtagacactgccacctgctggacaaagtgagcattga 397
|||||| |||||||||||||||||||| |||||||||
Sbjct: 259 gtagacgctgccacctgctggacaaagcgagcattga 223
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 792
Length adjustment: 9
Effective length of query: 388
Effective length of database: 783
Effective search space: 303804
Effective search space used: 303804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no454_p23.g1 MSMg01no454_p23.g1 CHROMAT_FILE:
MSMg01no454_p23.g1 PHD_FILE: MSMg01no454_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:22 2005
(473 letters)
>mm_chr7_133302517_133303389
Length = 873
Score = 884 bits (457), Expect = 0.0
Identities = 469/473 (99%)
Strand = Plus / Plus
Query: 1 atgcaggatagagctacatagtgagactttgtctaaaagcaaacaaacaaaagaactgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgcaggatagagctacatagtgagactttgtctaaaagcaaacaaacaaaagaactgtc 260
Query: 61 ccctccaaatacgtgttatagcatggataaacctagagaatcctgttaagtgaagaaagc 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccctccaaatacttgttatagcatggataaacctagagaatcctgttaagtgaagaaagc 320
Query: 121 catatgacatgatatgatatatatgatatgataataaaactatatgaaaggttcaaaaca 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 catatgacatgatatgatatatatgatatgataataaagctatatgaaaggttcaaaaca 380
Query: 181 gacaaatccctatggacaaaaagtagattagtggttgccggggactggaggagagaagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacaaatccctatggacaaaaagtagattagtggttgccggggactggaggagagaagaa 440
Query: 241 ctgtgttctcttgtggactcagggttgctttctgaggtgataaaaaatgttttggattta 300
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgtgacctcttgtggactcagggttgctttctgaggtgataaaaaatgttttggattta 500
Query: 301 aaggtagctgtaggactttcaaaagcacttaagcccctgaacagccacagtttaaagtgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaggtagctgtaggactttcaaaagcacttaagcccctgaacagccacagtttaaagtgg 560
Query: 361 gcatgtacagctcctgtcctagacctgttctcagaatgtcttatatgtttttaaaggcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcatgtacagctcctgtcctagacctgttctcagaatgtcttatatgtttttaaaggcat 620
Query: 421 aaaatgcagggcaagtgcacaagacatgtccctgactatataaacttaatgtc 473
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaatgcagggcaagtgcacaagacatgtccctgactatataaacttaatgtc 673
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
