Query= MSMg01no455_m07.b1 MSMg01no455_m07.b1 CHROMAT_FILE:
MSMg01no455_m07.b1 PHD_FILE: MSMg01no455_m07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:22 2005
(105 letters)
>mm_chr7_95574124_95574629
Length = 506
Score = 174 bits (90), Expect = 1e-48
Identities = 102/106 (96%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 1 gttcatttcaagaactctccatactaaatccacctgggcctctttcc-aataatctaaat 59
|||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 gttcatttcaagaactttccacactaaatccacctgggcctctttccaaataatctaaat 260
Query: 60 gttaatgtgtacttgtagatgactgccacattcctgaatcaatact 105
||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 gttaatgtgtacttgtagatgactgccgcattcctgaatcaatact 306
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 105
Length of database: 506
Length adjustment: 8
Effective length of query: 97
Effective length of database: 498
Effective search space: 48306
Effective search space used: 48306
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no455_m07.g1 MSMg01no455_m07.g1 CHROMAT_FILE:
MSMg01no455_m07.g1 PHD_FILE: MSMg01no455_m07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:22 2005
(560 letters)
>mm_chr7_95788681_95789640
Length = 960
Score = 1013 bits (524), Expect = 0.0
Identities = 551/560 (98%), Gaps = 1/560 (0%)
Strand = Plus / Minus
Query: 1 gaattctacaccttgctctgaaggcgaagaggagactggcttccagacagctaggactag 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 920 gaattctacaccttgctctgaaggcgaa-aggagactggcttccagacagctaggactag 862
Query: 61 ggtcttaaaacccatgcccacagtgacacacttcctccaacaaagtcacacctactcaaa 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 861 ggtcttaaaacccatgcccacagtgacacacttcctccaacaaagccacacctactcaaa 802
Query: 121 caagtgccaccccctggaccaagcatatttaatccatcacactaaataagtgctttgctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 caagtgccaccccctggaccaagcatatttaatccatcacactaaataagtgctttgctg 742
Query: 181 tctagaggacattttctatacaaatactgttaaaagagtgctgctattaacaagatttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tctagaggacattttctatacaaatactgttaaaagagtgctgctattaacaagatttaa 682
Query: 241 atttatattctaatgatccatgtacatttgctaacaccagacacagaaatggagacaaat 300
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acaaagattctaatgatccatgtacatttgctaacaccagacacagaaatggagacaaat 622
Query: 301 agtaactagagcccagccttagtgaagtggaccatttgaagaatagtagagtgcatagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agtaactagagcccagccttagtgaagtggaccatttgaagaatagtagagtgcatagtt 562
Query: 361 ctgtgggtaaaccagtaaagctgaaaacttacttgtgaagaatgcagaagagagatgggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgtgggtaaaccagtaaagctgaaaacttacttgtgaagaatgcagaagagagatgggt 502
Query: 421 gcattggatgcgatgatgcaagggttgcctcgtaggatactgctcagtataggactgtga 480
||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 501 gcattggatacgatgatgcaagggttgcctcataggatgctgctcagtataggactgtga 442
Query: 481 tcctctgggttgtctccagagatctggaaagaaaacacctttcaaagggaaatgagacac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcctctgggttgtctccagagatctggaaagaaaacacctttcaaagggaaatgagacac 382
Query: 541 aggagtggtgctgtctccta 560
||||||||||||||||||||
Sbjct: 381 aggagtggtgctgtctccta 362
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 960
Length adjustment: 10
Effective length of query: 550
Effective length of database: 950
Effective search space: 522500
Effective search space used: 522500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
