Query= MSMg01no457_c23.b1 MSMg01no457_c23.b1 CHROMAT_FILE:
MSMg01no457_c23.b1 PHD_FILE: MSMg01no457_c23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:18 2005
(435 letters)
>mm_chr7_146781669_146782503
Length = 835
Score = 841 bits (435), Expect = 0.0
Identities = 435/435 (100%)
Strand = Plus / Plus
Query: 1 cacaaaattccagcagtcgctgtgtgttacatgcaatggcccctggggaaccagatctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacaaaattccagcagtcgctgtgtgttacatgcaatggcccctggggaaccagatctgg 260
Query: 61 gcagaagaggctgtggtttcctgtgtggcagatggtagctttaggctgggcaggcaacga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcagaagaggctgtggtttcctgtgtggcagatggtagctttaggctgggcaggcaacga 320
Query: 121 gaagaggggggctagggacactgagtgctgccctaagcagggtaacctcctgggaatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagaggggggctagggacactgagtgctgccctaagcagggtaacctcctgggaatgat 380
Query: 181 ggtccggagagcttcgtgagaaatgctgagaagtgttgatgcattatgtggaccccagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtccggagagcttcgtgagaaatgctgagaagtgttgatgcattatgtggaccccagct 440
Query: 241 ttgatgagtcccctccagaaaccgggtgtggcccctgagtgaacagtggcagaacaggga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgatgagtcccctccagaaaccgggtgtggcccctgagtgaacagtggcagaacaggga 500
Query: 301 ctgatcttcaaaggccttgcttcagagctccttaaaacacctcagggaaaggtttgcctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgatcttcaaaggccttgcttcagagctccttaaaacacctcagggaaaggtttgcctt 560
Query: 361 gcaaacttccttgggtggagacaaaagacaaggagtgtaagcaagggcaccaggcacaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcaaacttccttgggtggagacaaaagacaaggagtgtaagcaagggcaccaggcacaag 620
Query: 421 ggaggtggctgctga 435
|||||||||||||||
Sbjct: 621 ggaggtggctgctga 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_c23.g1 MSMg01no457_c23.g1 CHROMAT_FILE:
MSMg01no457_c23.g1 PHD_FILE: MSMg01no457_c23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:18 2005
(382 letters)
>mm_chr7_146946166_146946946
Length = 781
Score = 708 bits (366), Expect = 0.0
Identities = 378/384 (98%), Gaps = 5/384 (1%)
Strand = Plus / Minus
Query: 1 ctgaaacacactgttctctaataagagattcattctggttgattataatgtcatgcaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ctgaaacacactgttctctaataagagattcattctggttgattataatgtcatgcaatg 522
Query: 61 atgaaaaatgctttctgccttcccctgatgccagtccctgctgttgggacttcacagatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 atgaaaaatgctttctgccttcccctgatgccagtccctgctgttgggacttcacagatg 462
Query: 121 ggctcctccattgctatgacctctgtccccttgtcctcagtgtgtttgtgtaggcagcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ggctcctccattgctatgacctctgtccccttgtcctcagtgtgtttgtgtaggcagcct 402
Query: 181 cggagactgcccatttccagaagtcctttgggatcctggcttcatttattgtgttaactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 cggagactgcccatttccagaagtcctttgggatcctggcttcatttattgtgttaactg 342
Query: 241 atcagttat--ctttcctagtgttattttctgacatgagaaacagtggagcttggcactg 298
||||||||| | || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 atcagttatccc---ccaagtgttattttctgacatgagaaacagtggagcttggcactg 285
Query: 299 agagatgtgttcttagtctatagttcttctctgaacagctgtgtctgtgtgacagcagca 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 agagatgtgttcttagtctatagttcttctctgaacagctgtgtctgtgtgacagcagca 225
Query: 359 atggcatcaggcaggcatgaggag 382
||||||||||||||||||||||||
Sbjct: 224 atggcatcaggcaggcatgaggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 781
Length adjustment: 9
Effective length of query: 373
Effective length of database: 772
Effective search space: 287956
Effective search space used: 287956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
