NNTTATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCCTGAATAATCATGTTTTCCAGGATGTAAAGTCAAACTCAA
ATGGACTGTTAAAATTACTTCGACCTCTTCATCCTCAACTACCACCATTT
TATCCTTCTTTGCTGTGTTTGTCATAGATGGCCTACTCCTTTGCATCCAA
TAATACCTCATATACCCCAGCTACTTATTTGAATATCCACGTTGGTTCTT
CATTTTTTTCTGGCTGTCATTTAATTGTCTGTTTCCCATACACCTTTTTA
ATATCCTCCAGTGAAGCAGGTTTCTGCATGCCCAGGATTTCATAGGAATC
CACCATTTTTAAGATAGATTTTTGGAAAAATTCCACGACCCAGTTGCCAG
CAAAGGTTGGGTGGGGTAGGGTAGAGGCTTAGGAGGAATAGAGAAGCTGG
TCTCCTTGCAGGTCTGACACGGCTGCTCTGATGCTAGTGGCAGTCACAGA
AATAGGTAGTGTCTTATAGCTTAATCATTATATCATTGCTTGTTTACTCC
AATTTGTTCTACTATTATAAGCTGTACTAAACCACTGGCTTACAAATTAT
TGAAACTCCTCCCATTCCCGAGCACTGCGTAGGATCAGTACTTTGTTGTT
TGGTGTGCACCGCCCTTGTTACCCCCGCCATATTATTCCCCTCCCCACGT
GTAACTATCTTTTATCTTAGCATTTTTCTCCCCTCCTATTTTTATGCTAC
TTCTCCTTTTATN

NNNNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAACTTTTATTAGTAA
TTATTGAACCCTTTATAATAAGGACTGCCATTAGAGCCCTCTGTAATATG
AAAACTGCAGTTAAGACTCAGCAAGCCTTCACATGTCACAAGCTATTTGC
ACTAACACAGAAAGCAGACATATTTACAAAAGAAATACATTCCTAAGGCA
GTAAAACTGCTACTTAAAGGTCATAAATTGGAAATGAACAGTTTATTGTA
GGTGCAAGGACAGAAAATAAATTATTGACTAGGTTTATCTATACAAAATG
TCAATACTAGTGAGACACAAGTCAGATGAATTGCCATATCAGCTTAACTT
AGATTTAAGGATTATAGTTTTATACTCCCAATGAACCTGTGGAGGTAGTG
GCAGATAATAAATGTTTAGTTTGATAACTAGTCTTAATGGAAACACTTGT
AAACATCTTTAGCTGTTACTTCTTATTCAATTTATGACTTGAAATTATAT
TTGGACATTTTGTAAACTCTTGAAAAAAAAAACAGGATGCTTTAAAATAC
CCTATGTGGATCTTTGGACCCTGCAATAAGTTTATTAATTTGGGATATGT
GGTACAATAAGCTTCCACCCGGCCTAACTATATAAATGCGGTATTTTCAT
ACGCGATGTGTTTAGTTCACTTTTCTTTAATTCTTGCATTTACTTGTTTC
ATAATTTTTTTTTTTTTGTTTCCN

Query= MSMg01no457_f01.b1 MSMg01no457_f01.b1 CHROMAT_FILE:
MSMg01no457_f01.b1 PHD_FILE: MSMg01no457_f01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:28 2005
         (434 letters)



>mm_chr7_60245868_60246700
          Length = 833

 Score =  650 bits (336), Expect = 0.0
 Identities = 407/432 (94%), Gaps = 5/432 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccctgaata-atcatgttttccaggatgtaaagtcaaactcaaatggactgttaa 63
           |||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccctgaagacaacatgttttccaggatgtaaagtcaaactcaaatggactgttaa 264

                                                                       
Query: 64  aattacttcgacctcttcatcctcaactaccaccattttatccttctttgctgtgtttgt 123
           ||||||||| |||||||||||||| |||   |||||||||||||||||||||||||||||
Sbjct: 265 aattacttccacctcttcatcctcgact---accattttatccttctttgctgtgtttgt 321

                                                                       
Query: 124 catagatggcctactcctttgcatccaataatacctcatataccccagctacttatttga 183
           |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 322 catagatggcctactcctttgcatccaataatacctcatatacctcagctacttgtttga 381

                                                                       
Query: 184 atatccacgttggttcttcatttttttctggctgtcatttaattgtctgtttcccataca 243
           ||||||| ||||||||||||||||||||  |||||||||||| |||||||||||||||||
Sbjct: 382 atatccatgttggttcttcatttttttccagctgtcatttaagtgtctgtttcccataca 441

                                                                       
Query: 244 cctttttaatatcctccagtgaagcaggtttctgcatgcccaggatttcataggaatcca 303
           ||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||
Sbjct: 442 cctttttaatatcctccagtgaaacaggtttctgtatgcccaggacttcataggaatcca 501

                                                                       
Query: 304 ccattttt-aagatagatttttggaaaaattccacgacccagttgccagcaaaggttggg 362
           |||||||| |||| ||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 502 ccattttttaagacagatttttggaaaaattccacgacccagttgccagcagaggtcggg 561

                                                                       
Query: 363 tggggtagggtagaggcttaggaggaatagagaagctggtctccttgcaggtctgacacg 422
           ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||| 
Sbjct: 562 tggggtagggtaggggcttaggaggaatagagaaactggtctccttgcaggtctggcaca 621

                       
Query: 423 gctgctctgatg 434
           ||||||||||||
Sbjct: 622 gctgctctgatg 633


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 833
Length adjustment: 9
Effective length of query: 425
Effective length of database: 824
Effective search space:   350200
Effective search space used:   350200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)