Query= MSMg01no461_g14.b1 MSMg01no461_g14.b1 CHROMAT_FILE:
MSMg01no461_g14.b1 PHD_FILE: MSMg01no461_g14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:00 2005
(244 letters)
>mm_chr7_95313666_95314309
Length = 644
Score = 472 bits (244), Expect = e-138
Identities = 244/244 (100%)
Strand = Plus / Plus
Query: 1 ttttgtactctctgcttcaaaatatctcaacatgaaaatagccttgagggaattctcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttgtactctctgcttcaaaatatctcaacatgaaaatagccttgagggaattctcata 260
Query: 61 tattgattgatttgttatattttatttttgatactttaaactttttccttgttctataat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattgattgatttgttatattttatttttgatactttaaactttttccttgttctataat 320
Query: 121 ttgtgtatgtatatatgtgtgcatgaacatgcatatacacttttgtgtgtatacagatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtgtatgtatatatgtgtgcatgaacatgcatatacacttttgtgtgtatacagatat 380
Query: 181 gcatgcttgtgtattcatgtgagtgtagagactagaggacaaccttggttcacttgaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcatgcttgtgtattcatgtgagtgtagagactagaggacaaccttggttcacttgaagc 440
Query: 241 tcat 244
||||
Sbjct: 441 tcat 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_g14.g1 MSMg01no461_g14.g1 CHROMAT_FILE:
MSMg01no461_g14.g1 PHD_FILE: MSMg01no461_g14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:00 2005
(390 letters)
>mm_chr7_95518972_95519761
Length = 790
Score = 540 bits (279), Expect = e-158
Identities = 318/337 (94%), Gaps = 12/337 (3%)
Strand = Plus / Minus
Query: 60 ggagcagaaggggcttgtgccccaggtcaggcccgggtagtctgcttccgtatttcccgc 119
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ggagcggaaggggcttgtgccccaggtcaggcccgggtagtctgcttccgtatttcccgc 731
Query: 120 agtctcaggttccgcacgattggattggggcaggccctgtgttccactcatcagaggtct 179
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 730 agtctcaggttccgcaagattggattggggcaggccctgtgttccactcaccagaggtct 671
Query: 180 taggatcccgtggggaatcctgtgtgggcccttgcgggtgtcgggcgactccgctggca- 238
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 taggatcccgtggggaatcctgtgtgggcccttgcgggtgtcgggcgactccgctggcaa 611
Query: 239 --ttttttt---gtggggctcgagtcactgtgtccccttttataaaaactcatttctccc 293
| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 610 gg------taccgtggggctcgagtcactgtgtccccttttataaagactcatttctccc 557
Query: 294 tctatctctgatgtaacaatgtattctgaaagttaatgtacacttggcaactgagaggaa 353
| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 556 tttatctctgatgtaacaatgtattctgaaagttaatgtacacttggcagttgagaggaa 497
Query: 354 agtctccacgtggagacttccaagattatttctaagc 390
|||||||||||||||||||||||||||||||||||||
Sbjct: 496 agtctccacgtggagacttccaagattatttctaagc 460
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space: 297561
Effective search space used: 297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
