Query= MSMg01no461_o08.b1 MSMg01no461_o08.b1 CHROMAT_FILE:
MSMg01no461_o08.b1 PHD_FILE: MSMg01no461_o08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:40 2005
(238 letters)
>mm_chr7_56962297_56962934
Length = 638
Score = 420 bits (217), Expect = e-122
Identities = 233/243 (95%), Gaps = 9/243 (3%)
Strand = Plus / Plus
Query: 5 aaaaaaaaatt-acctttcccag--------ttcttatttccatattttttatttcatta 55
||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 196 aaaaaaaaatttacctttcccagaaacccagttcttatttccatattttttatttcatta 255
Query: 56 ggagataaggagttaggaattggattttataacagttccattagaagtatgtctaatctt 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ggagataaggagttaggaattggattttataacagttccattagaagtatgtctaatctt 315
Query: 116 gaggagcctctaactctaggtagtgcaacgaattagcactgaaagataaggagtgcgaaa 175
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 316 gaggagcctctaactctaggtagtgcaacgaattagcaccgaaagataaggagtgcgaaa 375
Query: 176 taatgccccttgctaacctgctgttatcagtcagcttgccctccaacccccaaaacacac 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 taatgccccttgctaacctgctgttatcagtcagcttgccctccaacccccaaaacacac 435
Query: 236 cca 238
|||
Sbjct: 436 cca 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_o08.g1 MSMg01no461_o08.g1 CHROMAT_FILE:
MSMg01no461_o08.g1 PHD_FILE: MSMg01no461_o08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:41 2005
(242 letters)
>mm_chr7_57133495_57134136
Length = 642
Score = 445 bits (230), Expect = e-129
Identities = 239/242 (98%)
Strand = Plus / Minus
Query: 1 ctgcacaggagagcaccttcctgagagcctcaaggactcaggcacaagcttcaggccttt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 442 ctgcacaggagagcaccttcctgagagcctcaaggactcaggcacaagcttcagaccttt 383
Query: 61 ccagtagcccgagcaacacagagtaatagagcaggcctttgtgctcagaggcctgaccat 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ccagtggcccgagcaacacagagtaatagagcaggcctttgtgctcagaggcctgaccat 323
Query: 121 atggtaggtgagttcctggaatctctgtcatagcattatctagaatgttcagcacaccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atggtaggtgagttcctggaatctctgtcatagcattatctagaatgttcagcacaccag 263
Query: 181 agtgttggacagtaggagaaaaggtgagaataccaattgccgagccgataggaagtggaa 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agtgttggacagtaggagataaggtgagaataccaattgccgagccgataggaagtggaa 203
Query: 241 tc 242
||
Sbjct: 202 tc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
