MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-463M21
Chromosome	7 (Build37)
Map Location	136,997,146 - 136,997,443
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC210714, LOC100043144, Ppapdc1a, Brwd2
Downstream gene	LOC100043150, Fgfr2, LOC546005, Ate1, LOC100043163, Nsmce4a, Tacc2, LOC619876, Btbd16
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC210714 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:210714
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 16 Proteins pseudo : _no_value

name	LOC100043144 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043144
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Ppapdc1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381925 MGI:2685936
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Brwd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207425 MGI:1920230
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043150 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043150
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Fgfr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14183 MGI:95523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC546005 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546005
definition	note : ring finger and WD repeat domain 3 pseudogene pseudo : _no_value

name	Ate1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11907 MGI:1333870
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100043163 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043163
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Nsmce4a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67872 MGI:1915122
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 154 ESTs, 4 Proteins

name	Tacc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57752 MGI:1928899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC619876 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619876
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	Btbd16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330660 MGI:3045247
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppapdc1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124377994 GeneID:381925 MGI:2685936
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidic acid phosphatase type 2 domain containing 1A transcript_id : NM_001080963.1

name	Brwd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368235 GeneID:207425 MGI:1920230
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bromodomain and WD repeat domain containing 2 transcript_id : NM_172255.2

name	LOC100043150 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257721 GeneID:100043150
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100043150 transcript_id : XM_001479643.1

name	Fgfr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116089354 GeneID:14183 MGI:95523
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibroblast growth factor receptor 2 transcript_id : NM_201601.2

name	Fgfr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116089348 GeneID:14183 MGI:95523
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibroblast growth factor receptor 2 transcript_id : NM_010207.2

name	Ate1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542150 GeneID:11907 MGI:1333870
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arginine-tRNA-protein transferase 1 transcript_id : NM_013799.2

name	Ate1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131185 GeneID:11907 MGI:1333870
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arginine-tRNA-protein transferase 1 transcript_id : NM_001029895.2

name	LOC100043163 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257724 GeneID:100043163
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043163 transcript_id : XM_001479657.1

name	Nsmce4a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257808 GeneID:67872 MGI:1915122
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 154 ESTs, 4 Proteins product : non-SMC element 4 homolog A (S. cerevisiae), transcript variant 1 transcript_id : XM_133876.7

name	Tacc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109148526 GeneID:57752 MGI:1928899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transforming, acidic coiled-coil containing protein 2 transcript_id : NM_206856.3

name	Tacc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:59624975 GeneID:57752 MGI:1928899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transforming, acidic coiled-coil containing protein 2 transcript_id : NM_001004468.2

name	Tacc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109148527 GeneID:57752 MGI:1928899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transforming, acidic coiled-coil containing protein 2 transcript_id : NM_021314.4

name	Btbd16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486657 GeneID:330660 MGI:3045247
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BTB (POZ) domain containing 16 transcript_id : NM_001081038.1

name	Ppapdc1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124377995 GeneID:381925 MGI:2685936
definition	codon_start : 1 product : phosphatidic acid phosphatase type 2 domain containing 1A protein_id : NP_001074432.1

name	Brwd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26986547 GeneID:207425 MGI:1920230
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : WD repeat domain 11 product : bromodomain and WD repeat domain containing 2 protein_id : NP_758459.1

name	LOC100043150 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257722 GeneID:100043150
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479693.1

name	Fgfr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116089355 GeneID:14183 MGI:95523
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005007 - fibroblast growth factor receptor activity [Evidence IEA]; GO:0008201 - heparin binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IGI]; GO:0030282 - bone mineralization [Evidence IMP]; GO:0045165 - cell fate commitment [Evidence IDA]; GO:0007267 - cell-cell signaling [Evidence IMP]; GO:0048562 - embryonic organ morphogenesis [Evidence IMP]; GO:0050673 - epithelial cell proliferation [Evidence IMP]; GO:0008543 - fibroblast growth factor receptor signaling pathway [Evidence IGI]; GO:0030324 - lung development [Evidence IGI]; GO:0016331 - morphogenesis of embryonic epithelium [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP] [Evidence IGI]; GO:0002053 - positive regulation of mesenchymal cell proliferation [Evidence IGI]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0007435 - salivary gland morphogenesis [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform IIIb is encoded by transcript variant 2; keratinocyte growth factor receptor; seminal vesicle shape product : fibroblast growth factor receptor 2 isoform IIIb protein_id : NP_963895.2

name	Fgfr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116089349 GeneID:14183 MGI:95523
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005007 - fibroblast growth factor receptor activity [Evidence IEA]; GO:0008201 - heparin binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IGI]; GO:0030282 - bone mineralization [Evidence IMP]; GO:0045165 - cell fate commitment [Evidence IDA]; GO:0007267 - cell-cell signaling [Evidence IMP]; GO:0048562 - embryonic organ morphogenesis [Evidence IMP]; GO:0050673 - epithelial cell proliferation [Evidence IMP]; GO:0008543 - fibroblast growth factor receptor signaling pathway [Evidence IGI]; GO:0030324 - lung development [Evidence IGI]; GO:0016331 - morphogenesis of embryonic epithelium [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP] [Evidence IGI]; GO:0002053 - positive regulation of mesenchymal cell proliferation [Evidence IGI]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0007435 - salivary gland morphogenesis [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform IIIc is encoded by transcript variant 1; keratinocyte growth factor receptor; seminal vesicle shape product : fibroblast growth factor receptor 2 isoform IIIc protein_id : NP_034337.2

name	Ate1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71274127 CCDS:CCDS21901.1 GeneID:11907 MGI:1333870
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0004057 - arginyltransferase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0016598 - protein arginylation [Evidence IDA]; GO:0042176 - regulation of protein catabolism [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : arginine-tRNA-protein transferase 1 isoform 3 protein_id : NP_001025066.1

name	Ate1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542151 CCDS:CCDS21902.1 GeneID:11907 MGI:1333870
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0004057 - arginyltransferase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0016598 - protein arginylation [Evidence IDA]; GO:0042176 - regulation of protein catabolism [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : arginine-tRNA-protein transferase 1 isoform 1 protein_id : NP_038827.2

name	LOC100043163 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257725 GeneID:100043163
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479707.1

name	Nsmce4a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82915091 GeneID:67872 MGI:1915122
definition	codon_start : 1 product : non-SMC element 4 homolog A isoform 1 protein_id : XP_133876.5

name	Tacc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52486843 CCDS:CCDS21903.1 GeneID:57752 MGI:1928899
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS] codon_start : 1 note : isoform c is encoded by transcript variant 3 product : transforming, acidic coiled-coil containing protein 2 isoform c protein_id : NP_001004468.1

name	Tacc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52486915 CCDS:CCDS21904.1 GeneID:57752 MGI:1928899
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : transforming, acidic coiled-coil containing protein 2 isoform a protein_id : NP_996738.2

name	Tacc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52486864 CCDS:CCDS21905.1 GeneID:57752 MGI:1928899
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : transforming, acidic coiled-coil containing protein 2 isoform b protein_id : NP_067289.2

name	Btbd16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486658 GeneID:330660 MGI:3045247
definition	codon_start : 1 product : BTB (POZ) domain containing 16 protein_id : NP_001074507.1

name	LOC100043144 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043144
definition	number : 2 pseudo : _no_value

name	LOC100043144 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043144
definition	number : 1 pseudo : _no_value

name	LOC619876 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:619876
definition	number : 1 pseudo : _no_value

name	LOC210714 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257807 GeneID:210714
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 16 Proteins product : similar to Rho family GTPase 2 pseudo : _no_value transcript_id : XR_034777.1

clone name	MSMg01-469B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469A16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-355C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119F11
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-463M21.T7 (MSMg01no463_m21.b1)	MSMg01-463M21.TJ (MSMg01no463_m21.g1)
ACC	AG548370	AG548371
length	740	851
length of high quality (start - end)	298 (336 - 633)	164 (82 - 245)
definition	CHROMAT_FILE: MSMg01no463_m21.b1 PHD_FILE: MSMg01no463_m21.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:38:21 2005	CHROMAT_FILE: MSMg01no463_m21.g1 PHD_FILE: MSMg01no463_m21.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:38:21 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NNAAGATCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCANAAA TCCGCGGAATTCACAACAGATTTACAAAGAAAGGATCCCTCACCCTGTGG GCACAGAAATGGACAACCACAACTTTATTGTGATTTCATTATTATTAGTA TTCTATCTCCATTTGTGTTTGAACCCACTGCTTTTCAGCATTTTTCCTAA ACAAGATATTATTTATTGAACATCTATAACATGCAGAATTAAAACGATAG CAGCAGCAGCAGCAGGATACCACTAGTTCAATGCTGTCCCGATCTTTAAT GCTTTCGAAATTTCAGGCATGCTAGTAAGTTTTGGGTTATGCTTTTTAAA ATTTAATCTCCAAAGCAAAACCTTAATCTGCATCGCACAGACAAAGGGAG ATGACAGCCGAGTGTAGTATTAAATGACATCAGCTCTGTGCTCACAGGCT CACGCTCAGACGCTGCCCCAGGGGAGACTTCTTTCCACAAGTCTTTACTG GGCACGGTTTGGGGTGGGGACAAATGCTTTCCCTGTTACCAGAGATGTGA GGAGTCTGCTGAGAGCAAGTCCTGACCTCAAGCAGTTTTTCTTCTGAGGG GCCATGACACCTGCAGAAACAGCTCCCAGACAGCTCACTGCTGGAACCCT TGAAGTAGCAGTGTTCTAGGCTTCTGCTTGTCTGTTTTGTTTTGTTTTTG TTTCCAATCTGATTCAGGGAAAATTATTTGTTAACAGAAA	TTCGTCTCAATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATGAGCAGTTTGTCTTTT TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGTTGGAGGATA CCTAACCAATATAGGAAGGAAAGGGAAAGAAAAAAAGGAAGGAAGGAAGG AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA GGACGACAGCGCCTCTTTGTGTGGGGGAGTGGAGGGGTGGACCACCGCTC GGGAAAGCGGCAGGGGGGGGCCCCAGAGAACTTTTTTTAGTACGACCGGC GGATCCAGGAATACCTCTTTTGTCCCCACACCCAGAGAGATGCCCCGGCG GTGTTACAATGCAGACTTGTTTCTTCCCCCCCCACCCCCCACCCCAAACT TACACTTCATCTACTAAGCTCGTGACCATACATTTTATAGGCCCCCCCTC CCCTGTATCATCCGCTATACCACATCTATTGATGTGTACCTCTCTCATCT CATCGCGCACTCACCCTCCCCCTCCTCTTTCCCCCCCTCAATTCATTTCT TTCCCATCATTCTCTTTTTTCCCCCTGTGGCTCCGCCAAGTTATATAGAC TCACTTCCTATACAGCTGGAAATACCACACCACTATGAATACCCCCACTC ACCCCGCACTCCCCTGTCGCCCAGCTCTCCCTCCCCCTCCCCATTACTCA CTACTTAAAATACATAACCACACAGCGGACCCCATCTAACTCACTCAGCG CACTACTCTCATATCTTCTTATCTTCATCCCCCTCCTATCCACCCTCTAC A
quality values	Open. Hide. 0 0 3 7 7 6 6 6 6 8 8 8 8 10 8 10 12 20 16 16 19 16 16 14 16 23 23 28 28 37 44 37 29 24 28 26 25 21 21 8 8 8 9 8 7 3 0 3 8 8 8 12 15 15 23 21 30 30 31 31 36 31 44 39 37 37 21 23 9 9 9 7 6 6 6 6 8 11 11 12 25 28 31 30 33 33 33 33 50 53 53 53 53 57 57 57 57 57 57 53 53 53 53 53 53 53 53 53 68 68 68 68 68 68 68 53 53 54 54 54 54 54 68 57 68 68 68 54 48 48 47 41 47 47 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 68 68 57 57 68 68 68 68 68 68 68 68 68 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 42 41 28 27 27 23 28 32 44 48 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 57 57 59 59 59 59 59 59 41 29 16 12 12 10 9 10 10 10 9 9 11 12 29 34 59 59 59 59 59 53 53 57 57 57 57 57 57 57 57 57 57 57 57 53 53 57 57 57 68 68 59 59 48 47 43 43 48 57 59 57 57 59 57 59 54 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 54 54 54 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 59 68 68 68 57 57 52 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 59 57 57 59 68 68 68 68 68 59 59 59 59 57 57 44 46 48 57 57 57 57 50 57 68 68 68 68 68 68 68 54 54 48 48 48 39 39 36 36 43 43 43 57 59 48 43 39 39 35 35 39 47 47 59 43 57 48 48 48 48 48 48 43 41 40 40 39 43 43 41 37 25 34 22 18 18 34 34 41 41 36 36 39 39 39 39 40 40 41 37 37 30 25 14 21 12 12 12 17 30 37 37 37 32 37 34 41 37 37 22 15 12 9 9 9 24 25 47 37 37 29 30 25 25 13 14 15 21 19 18 16 13 15 18 15 17 22 20 24 39 31 29 31 27 28 28 27 24 19 19 19 12 12 12 19 18 14 10 14 10 15 15 12 12 16 21 14 18 18 15 15 11 11 11 11 11 11 10 8 8 8 8 8 9 10 10 16 19 16 18 18 27 18 21 11 10 9 10 9 9 9 11 19 11 19 19 21 13 9 12 10 10 10 10 14 21 13 11 9 10 11 9 8 10 9 9 9 9 9 9 10 10 12 12 12	Open. Hide. 6 6 7 15 19 8 8 8 8 10 17 11 11 10 8 7 8 6 6 8 9 17 30 30 37 37 37 37 37 37 29 29 32 29 28 37 23 23 9 9 11 10 10 10 10 13 13 24 22 28 30 25 29 32 30 30 28 28 33 33 59 50 59 50 50 37 22 20 17 15 8 8 8 8 9 10 21 27 30 33 33 40 37 41 48 53 53 47 57 48 48 48 57 48 57 48 57 57 57 48 53 50 50 54 54 54 54 54 54 48 48 48 48 48 57 48 54 54 54 54 54 54 54 54 57 54 48 46 46 43 43 44 57 48 57 57 57 57 57 48 48 48 57 57 57 50 50 50 50 50 50 57 57 57 57 57 48 48 47 57 57 68 50 50 57 57 57 57 57 54 54 57 57 48 48 48 57 57 59 59 57 59 59 54 54 54 54 48 57 48 48 48 57 57 57 54 54 54 54 54 57 57 57 57 57 54 54 54 54 54 54 54 54 54 54 48 48 57 57 57 57 57 57 48 48 48 48 48 48 43 43 33 33 28 37 37 43 43 28 28 13 12 12 23 18 20 18 12 16 10 8 8 8 8 8 8 8 7 6 10 8 13 10 10 11 11 14 10 8 10 8 8 8 8 10 10 9 9 9 9 9 12 11 11 11 11 11 10 10 10 8 10 8 8 8 8 8 8 8 11 11 12 18 9 10 10 8 8 8 8 22 8 11 8 10 12 13 10 8 10 8 8 8 11 11 8 10 7 7 7 7 7 8 10 21 23 23 11 10 9 8 8 8 8 8 8 10 9 9 9 9 9 9 11 12 16 16 14 14 14 15 18 13 17 15 13 10 8 8 8 9 9 11 9 6 8 8 8 8 8 11 11 12 19 8 8 8 12 12 8 8 8 15 8 10 10 8 8 8 8 6 6 8 8 9 10 10 8 8 10 8 8 9 11 11 11 11 13 22 21 17 12 10 10 10 9 11 11 13 16 15 15 10 10 10 15 12 17 8 10 9 9 7 7 9 9 10 11 16 11 11 10 8 8 9 8 8 8 8 8 8 10 10 11 11 11 9 8 8 8 13 12 8 9 11 11 12 8 8 6 6 8 8 8 8 8 8 8 8 8 9 10 11 20 19 9 9 9 10 12 11 10 8 8 8 8 8 8 8 11 10 10 10 8 8 8 8 7 6 8 8 8 8 6 6 8 8 12 12 11 11 10 9 10 9 8 8 8 8 8 8 8 10 8 8 6 6 8 8 8 8 6 6 8 8 6 6 8 8 8 8 8 8 8 8 10 11 13 15 11 11 10 10 9 8 8 8 8 8 10 12 14 16 16 14 15 10 10 10 10 10 9 9 9 8 8 8 10 8 10 8 10 11 8 8 8 8 6 7 8 8 9 12 12 12 18 17 21 15 16 15 15 13 13 12 12 11 8 7 7 7 10 8 8 8 7 6 6 8 8 8 8 11 9 8 8 8 8 6 6 13 8 6 6 8 12 15 14 8 8 6 6 8 8 8 8 8 8 11 8 8 8 8 8 8 10 8 8 8 6 8 8 8 8 8 8 8 8 8 8 8 8 11 8 8 7 7 8 8 8 8 8 9 9 9 10 10 8 8 8 8 12 8 10 9 6 8 8 6 8 8 8 8 8 8 8 8 8 8 8 10 9 9 10 15 10 12 8 6 8 10 9 10 12 11 10 8 8 6 6 10 8 8 8 8 8 8 8 8 9 9 9 9 9 9 9 8 10 8 8 8 8 7 6 8 6 6 8 8 8 8 8 8 7 6 8 8 8 8 8 8 8 8 10 13 13 8 8 8 8 10 8 6 6 8 8 8 8 8 8 6 6 8 8 8 8 8 8 10 8 8 8 8 8 8 11 11 13 18 18 24 20 22 24 15 15 8 8 8 10 8 10 10 8 15 15 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no463_m21.b1 MSMg01no463_m21.b1 CHROMAT_FILE:
MSMg01no463_m21.b1 PHD_FILE: MSMg01no463_m21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:21 2005
         (298 letters)



>mm_chr7_136996946_136997643
          Length = 698

 Score =  561 bits (290), Expect = e-164
 Identities = 296/298 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   gttatgctttttaaaatttaatctccaaagcaaaaccttaatctgcatcgcacagacaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gttatgctttttaaaatttaatctccaaagcaaaaccttaatctgcatcgcacagacaaa 439

                                                                       
Query: 61  gggagatgacagccgagtgtagtattaaatgacatcagctctgtgctcacaggctcacgc 120
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 438 gggagatgacagccgagtgtagtattaaatggcatcagctctgtgctcacaggctcacgc 379

                                                                       
Query: 121 tcagacgctgccccaggggagacttctttccacaagtctttactgggcacggtttggggt 180
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 378 tcagacgctgccccaggggagacttcttttcacaagtctttactgggcacggtttggggt 319

                                                                       
Query: 181 ggggacaaatgctttccctgttaccagagatgtgaggagtctgctgagagcaagtcctga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ggggacaaatgctttccctgttaccagagatgtgaggagtctgctgagagcaagtcctga 259

                                                                     
Query: 241 cctcaagcagtttttcttctgaggggccatgacacctgcagaaacagctcccagacag 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cctcaagcagtttttcttctgaggggccatgacacctgcagaaacagctcccagacag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space:   199121
Effective search space used:   199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information