Query= MSMg01no471_m18.b1 MSMg01no471_m18.b1 CHROMAT_FILE:
MSMg01no471_m18.b1 PHD_FILE: MSMg01no471_m18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:11 2005
(682 letters)
>mm_chr7_143384546_143385628
Length = 1083
Score = 1266 bits (655), Expect = 0.0
Identities = 673/679 (99%), Gaps = 1/679 (0%)
Strand = Plus / Plus
Query: 5 gaattcattaagataacctgcatgtcataaatgcattttatttaatggctctggcattag 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattaagacaatctgcatgtcataaatgcattttatttaatggctctggcattag 264
Query: 65 ttacatgaacaacagctgagtgttcatgtaaatttttgatgtttgccctgaaaagtaaca 124
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 265 ttacatgaacaacagctgagtgttcgtgtaaatttttgatgtttgccctgaaaagtaaca 324
Query: 125 ccaaagtcaagcaagcagtcaaagcaaccttccaattgttgttgg-ttttttttttttaa 183
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 325 ccagagtcaagcaagcagtcaaagcaaccttccaattgttgttgggttttttttttttaa 384
Query: 184 ttcttaggtcatataggggataaccttggactcaccctcagttcttcttgaccctaacac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcttaggtcatataggggataaccttggactcaccctcagttcttcttgaccctaacac 444
Query: 244 ctgcttagtccagtggaatatggcatttccatcttggttctctcccagaaaacttacttg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgcttagtccagtggaatatggcatttccatcttggttctctcccagaaaacttacttg 504
Query: 304 atgaagaccttgagtattggcaagtgggacttgctctaaaattaccacattagcttggat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atgaagaccttgagtattggcaagtgggacttgctctaaaattaccacattagcttggat 564
Query: 364 gcattcctgaaggtctttctattcttgggacagcctctttatcactgaaatgggcttttt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcattcctgaaggtctttctattcttgggacagcctctttatcactgaaatgggcttttt 624
Query: 424 tagaaagtgaccacaagctgtaaccactgtccagctgatgatcttcaagtacaaggccac 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aagaaagtgaccacaagctgtaaccactgtccagctgatgatcttcaagtacaaggccac 684
Query: 484 atcttaaaagatggtaagtggagcctatgttgtcatggacatttgtgggactaaggcaga 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atcttaaaagatggtaagtggagcctatgttgtcatggacatttgtgggactaaggcaga 744
Query: 544 gttaccacaaggcatcatcccttgatcacaagaggtctggagactcatgatatactcatg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gttaccacaaggcatcatcccttgatcacaagaggtctggagactcatgatatactcatg 804
Query: 604 gcaggtgtattatcttcaaaatgacttgggcatttttgggggagtagggggctggctgtc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gcaggtgtattatcttcaaaatgacttgggcatttttgggggagtagggggctggctgtc 864
Query: 664 acatgtgtgcatatttcaa 682
|||||||||||||||||||
Sbjct: 865 acatgtgtgcatatttcaa 883
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1083
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1073
Effective search space: 721056
Effective search space used: 721056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_m18.g1 MSMg01no471_m18.g1 CHROMAT_FILE:
MSMg01no471_m18.g1 PHD_FILE: MSMg01no471_m18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:11 2005
(551 letters)
>mm_chr7_143572117_143573067
Length = 951
Score = 949 bits (491), Expect = 0.0
Identities = 536/551 (97%)
Strand = Plus / Minus
Query: 1 ctgctgccctcagcaatgttttccagcttcactttctctgaagcccttgcttttccttct 60
||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 751 ctgctgccctcagcagcgttttccagcttcactttctctgaagcccttgcatttgcttct 692
Query: 61 tgttctctttccctaactctcgaagctctctcccatgagtcacaaacataaccagagaat 120
||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 691 tgttctcttgccctaaccctcgaagctctcccccatgagtcacaaacataaccagagaat 632
Query: 121 gctcacactcatgagtgctctgaagtattccttgcattgattggtttgaaggtcatctca 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gctcacactcacgagtgctctgaagtattccttgcattgattggtttgaaggtcatctca 572
Query: 181 tctcttgctaccatgttgaaatcctttggccccttgcataaggtcagcacggtaggttgg 240
|||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 571 tctcttgctaccgtgttgaaatcctttggccccttgcataaggtcagcatggtaggttgt 512
Query: 241 ctcctggcatgtatctctttccatttcatatgtttcctcatcgcgtatgtataaggaaag 300
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 511 ttcctggcatgtatctctttccatttcatatgtttcctcatcacgtatgtataaggaaag 452
Query: 301 ttctacctgctatgtgaaggcacccaggctgaaggagtgaatctactgatgtcacagagg 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tactacctgctatgtgaaggcacccaggctgaaggagtgaatctactgatgtcacagagg 392
Query: 361 cagagggcaggcaagcaagtctggaattttgtcaatgagattagaagtgaaagtgctggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cagagggcaggcaagcaagtctggaattttgtcaatgagattagaagtgaaagtgctggc 332
Query: 421 tgagctctggaccagccttccagtgtcagggagatgtggctggttagtgtatgtgggtgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 331 tgagctctggaccagccttccagtgtcagggagatgtggctggttagtgtatgcgggtgc 272
Query: 481 tcagaatagaatgctcttctgctgcttttaatcctccctgtgagcctatgcgttcctgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tcagaatagaatgctcttctgctgcttttaatcctccctgtgagcctatgcgttcctgct 212
Query: 541 cttctttcttg 551
|||||||||||
Sbjct: 211 cttctttcttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
