Query= MSMg01no472_b04.b1 MSMg01no472_b04.b1 CHROMAT_FILE:
MSMg01no472_b04.b1 PHD_FILE: MSMg01no472_b04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:34 2005
(536 letters)
>mm_chr7_49237944_49238880
Length = 937
Score = 760 bits (393), Expect = 0.0
Identities = 415/423 (98%), Gaps = 4/423 (0%)
Strand = Plus / Minus
Query: 5 gaattcagtgattac--aggcttgctctattacacatgattgcactgaaatgtgacttac 62
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gaattcagtga-cacaaaggcttgctctattacacatgattgcactgaaatgtgacttac 364
Query: 63 tgagaagaaaggtccctgtgcctgttcattgccttcagtcttataatagacaatttctgt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgagaagaaaggtccctgtgcctgttcattgccttcagtcttataatagacaatttctgt 304
Query: 123 ctgctatgtactcattgcatattgctaatctaaagcaaagacagttgtaacaatgcacta 182
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 303 ctgctatgtactcattgcatattgctaatctaaagaaaagacagttgtaacaatgcacaa 244
Query: 183 tgtgaccag-ttttttttcaggctttcttttttacaatattgtttattaggtattttcct 241
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tgtgaccagtttttttttcaggctttcttttttacaatattgtttattaggtattttcct 184
Query: 242 catttacatttccaatgctatcccaaaagtcccccataccctccccccaatcccctaccc 301
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 183 catttacatttccaatgctatcccaaaagtcccccataccctcaccccaatcccctaccc 124
Query: 302 acccactcccactttttggccctggcattcctctgtacaggggcatataaagtttgcaag 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 acccactcccactttttggccctggcattcctctgtacaggggcatataaagtttgcaag 64
Query: 362 tccaatgggactctgtttccgttgatggccgactaggccatcttttgatacatatgcagc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tccaatgggactctgtttccgttgatggccgactaggccatcttttgatacatatgcagc 4
Query: 422 tag 424
|||
Sbjct: 3 tag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 937
Length adjustment: 10
Effective length of query: 526
Effective length of database: 927
Effective search space: 487602
Effective search space used: 487602
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_b04.g1 MSMg01no472_b04.g1 CHROMAT_FILE:
MSMg01no472_b04.g1 PHD_FILE: MSMg01no472_b04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:35 2005
(602 letters)
>mm_chr7_49672967_49673968
Length = 1002
Score = 775 bits (401), Expect = 0.0
Identities = 404/405 (99%)
Strand = Plus / Minus
Query: 1 tttctagggttttcaaaaactatttaaaagtaccacagtgtgtcttttcacctaatactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tttctagggttttcaaaaactatttaaaagtaccacagtgtgtcttttcacctaatactc 346
Query: 61 agaggtaaagcttatctgggcaggttctctttcctagtgacaaagaggttaaacaatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 agaggtaaagcttatctgggcaggttctctttcctagtgacaaagaggttaaacaatgaa 286
Query: 121 tgtattctgttttgtgatgtcctgggaaacaaaatgcaataaagcaaatgtaaaccctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tgtattctgttttgtgatgtcctgggaaacaaaatgcaataaagcaaatgtaaaccctat 226
Query: 181 ggttgaaaatgcagaggtggtgagagaagattaaatagaattattggacctcttattaac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 agttgaaaatgcagaggtggtgagagaagattaaatagaattattggacctcttattaac 166
Query: 241 aggcaatataggaaattaaaaatgtgtatgattggagtatgagagtgtaggaataccaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 aggcaatataggaaattaaaaatgtgtatgattggagtatgagagtgtaggaataccaag 106
Query: 301 aaaaaaacaattttcttagtcatgatcatagaaaaaggagaagaatccattagcaaaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 aaaaaaacaattttcttagtcatgatcatagaaaaaggagaagaatccattagcaaaggc 46
Query: 361 atagaacatatattcactaaaggtatacaagaaaatttccttaag 405
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 atagaacatatattcactaaaggtatacaagaaaatttccttaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
