Query= MSMg01no472_i10.b1 MSMg01no472_i10.b1 CHROMAT_FILE:
MSMg01no472_i10.b1 PHD_FILE: MSMg01no472_i10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:11 2005
(270 letters)
>mm_chr7_75345096_75345766
Length = 671
Score = 443 bits (229), Expect = e-129
Identities = 256/265 (96%), Gaps = 1/265 (0%)
Strand = Plus / Minus
Query: 5 gaattctgcc-tatccaagaactcagtctgtggacaggtggattaacatggatgtacggt 63
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 469 gaattctgccagattcaagaactcagtctgtggacaggtggattaacatggatgtacgct 410
Query: 64 gggcatagggggaagaagagatgggggagcgagggttgcttcccctagggaaacggcttc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gggcatagggggaagaagagatgggggagcgagggttgcttcccctagggaaacggcttc 350
Query: 124 ccgtgcagagaaatgtcttgcagagggtattgaatgatgaaggggtttggttccagctaa 183
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 349 ccgtgcagaggaatgtcttgcagagtgtattgaatgatgaaggggtttggttccagctaa 290
Query: 184 gtggtttccgccccattcttcttattgagaggagtcagtggtcagcaattaagcctatga 243
||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 289 gtggtttccgccccattcttcagattgagaggagtcagtggtcagcagttaagcctatga 230
Query: 244 actgcagcagtgaccaggatattga 268
|||||||||||||||||||||||||
Sbjct: 229 actgcagcagtgaccaggatattga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 671
Length adjustment: 9
Effective length of query: 261
Effective length of database: 662
Effective search space: 172782
Effective search space used: 172782
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no472_i10.g1 MSMg01no472_i10.g1 CHROMAT_FILE:
MSMg01no472_i10.g1 PHD_FILE: MSMg01no472_i10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:11 2005
(483 letters)
>mm_chr7_75309301_75310183
Length = 883
Score = 843 bits (436), Expect = 0.0
Identities = 472/484 (97%), Gaps = 2/484 (0%)
Strand = Plus / Plus
Query: 1 tcatacagaaggagagctgaggagcacagcgccttgtatagtcctagaggcccatattgt 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 tcatacagaaggagagctgaggagcacagtgccttgtatagtcctagaggcccatattgt 260
Query: 61 ctgtatttctctctgttcaccagtaccacgagatcccttttaatcagtgtggccactgca 120
|||||||||||||||||||||||||||| | | ||||||||||| ||||||||||||||
Sbjct: 261 ctgtatttctctctgttcaccagtaccatgggctcccttttaatgggtgtggccactgca 320
Query: 121 ttttgaagagtccatgggtgttaaatgttaatggctcatcccatagcaaaccaggagtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttgaagagtccatgggtgttaaatgttaatggctcatcccatagcaaaccaggagtct 380
Query: 181 aaaggagagaatggacttgggttgggttgtgtctttacccaagtggaattcacagacggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaggagagaatggacttgggttgggttgtgtctttacccaagtggaattcacagacggt 440
Query: 241 aatatctacgcagatttcagaggaggtgtgcttttctagccagtctccggtacactacgc 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 441 aagatctacgcagatttcagaggaggtgtgcttttctagccagtctccggtacgccacgc 500
Query: 301 tggtggtggcagcggatgacccaggggaggctgtgtagcccgtcatccttaccaccctct 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 tggtggtggcagcggatgacccaggggaggctgtgtagcccatcatccttaccaccctct 560
Query: 361 ctccctctgttcc-cacagtgtgcccaagtgtgtgcgggaagcgagcctgcaccgagaac 419
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctccctctgt-cctcacagtgtgcccaagtgtgtgcgggaagcgagcctgcaccgagaac 619
Query: 420 aacgagtgctgccacccggagtgcctgggcagctgccacacaccggacgacaacacaacc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aacgagtgctgccacccggagtgcctgggcagctgccacacaccggacgacaacacaacc 679
Query: 480 tgcg 483
||||
Sbjct: 680 tgcg 683
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space: 412929
Effective search space used: 412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
