ATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGTTCTCTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTT
TCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCC
TATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTT
TTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCAT
TAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTC
TGTTCAGGAATTTTTCCCCTGTGTCCATATCTTCAAGGCTTCTTAACAAA
TGGTCACTCTTGTCCCTCCTGTAACTATAGCTTCCTTAGGCCCATGTCTG
GGCCACAGCAACAGTTTTCCCCTTGTGCTCATGTAGGACTACTTCAACAA
GCCCCCTCCTAACCTCTCCATCCTTCTTTTGCCCTGAGTCCCCAAATTTG
TTCTAGCTGTACCACTCCAAGAAAGCTACCTCCTCCTTGCTGCCAAGACT
CCAAAAATATTCCCTTCCTTTCAGCCCAACTGTTCTCTTCCTAAAGCTAA
ATTCTCACTATTGATAACCAAATAAGCTGCAGTATTGTAGATGACCTTGT
GTTAACAGTGCTCTCAGCCAAGAACCTTACCACTTTCCCAACTTATTAAC
TCTTTCCTGTCCTGTCTGTAATTAAACCTAATCATAAAGACACTATGATG

TATCTATGATAGGGGCAGGCCCGGCGGCCGCCTGTCCGACAACAGGTAGG
GGAACTATACATTGCCCCGCGGAGTTCTCACTCTCTCTCCATCTCCCTCT
CTCCTCTCCCTCCTCATCTCTCCCTCTCTCCCTCTTCTTCTCTCCCTCTC
TCTCTCCCTCTCTCCTCCTCTCCCTCTCTCCTTCTCTCCCTCTCTCTCTC
CCTCTCTCCTTCTCTCCCTCTCTCCTTCTCTCCCTCTCCCTCCTCTTCTC
TCCTTCTCTCCCCCTCCCCCTCCCTGTGTAGTTTGTCAGGTAATCAATTT
TATTTAAGAACTTATAAAAAAATGTCTTTTTACATTTGTCAAAGAAGTAA
AACTGTCCCTTTTAACTTTCTGTTTCTTCCTGGATACTTGGGATAACCTC
TTGATTTCCTACATGGGTGACCCACATTACCTACTATATATATTTGGCTC
CCAGTGAAGATTAGACTGAAGTATTTATGTTACCAACTGATAAAAATCTC
TTATATTTTACTTGAAAAGACAGGTTGCATTTTCAATTAAAATTGCTTCA
TGGCCAAGGGCGTTTCAAATTTAACAGCTGGCGTTATAGAAAAGGTTGTA
TAAACCACATTAGATGGAAAGGAATGGAAGTATACGCGGGTGTTTTTTCC
TGGCCATATTCTTGCTGGAAACTGTGAACTCTCTTATTGCCACCTTTTCC
AGCTGCCCTTTACCGGCCTACCGATGGCGACCTTGGAAGTGGG

Query= MSMg01no479_d15.b1 MSMg01no479_d15.b1 CHROMAT_FILE:
MSMg01no479_d15.b1 PHD_FILE: MSMg01no479_d15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:08 2005
         (705 letters)



>mm_chr7_57790947_57792051
          Length = 1105

 Score = 1317 bits (681), Expect = 0.0
 Identities = 696/701 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttgttctcttctgagccccattttttaatggggttatttgattttctgaagtc 64
           |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgttcagttctgagccccattttttaatggggttatttgattttctgaagtc 264

                                                                       
Query: 65  caccttcttgagttctttatatatgttggatattagtcccctatctgatttaggataggt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caccttcttgagttctttatatatgttggatattagtcccctatctgatttaggataggt 324

                                                                       
Query: 125 aaagatcctttcccaatctgttggtggcctttttgtcttattgacggtgtcttttgcctt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaagatcctttcccaatctgttggtggcctttttgtcttattgacggtgtcttttgcctt 384

                                                                       
Query: 185 gcagaaactttggagtttcattaggtcccatttgtcaattctcgatcttacagcacaagc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcagaaactttggagtttcattaggtcccatttgtcaattctcgatcttacagcacaagc 444

                                                                       
Query: 245 cattgctgttctgttcaggaatttttcccctgtgtccatatcttcaaggcttcttaacaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cattgctgttctgttcaggaatttttcccctgtgtccatatcttcaaggcttcttaacaa 504

                                                                       
Query: 305 atggtcactcttgtccctcctgtaactatagcttccttaggcccatgtctgggccacagc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atggtcactcttgtccctcctgtaactatagcttccttaggcccatgtctgggccacagc 564

                                                                       
Query: 365 aacagttttccccttgtgctcatgtaggactacttcaacaagccccctcctaacctctcc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aacagttttccccttgtgctcatgtaggactacttcaacaagccccctcctaacctctcc 624

                                                                       
Query: 425 atccttcttttgccctgagtccccaaatttgttctagctgtaccactccaagaaagctac 484
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 625 atccttcttttgccctgagtccccaaatttgttctagctgtaccattccaagaaagctac 684

                                                                       
Query: 485 ctcctccttgctgccaagactccaaaaatattcccttcctttcagcccaactgttctctt 544
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctcctccttgcttccaagactccaaaaatattcccttcctttcagcccaactgttctctt 744

                                                                       
Query: 545 cctaaagctaaattctcactattgataaccaaataagctgcagtattgtagatgaccttg 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cctaaagctaaattctcactattgataaccaaataagctgcagtattgtagatgaccttg 804

                                                                       
Query: 605 tgttaacagtgctctcagccaagaaccttaccactttcccaacttattaactctttcctg 664
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tgttaacagtgctctcagccgagaaccttaccactttcccaacttattaactctttcctg 864

                                                    
Query: 665 tcctgtctgtaattaaacctaatcataaagacactatgatg 705
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 tcctgtctgtaattaaacctaatcataaagacactatgatg 905


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 705
Length of database: 1105
Length adjustment: 10
Effective length of query: 695
Effective length of database: 1095
Effective search space:   761025
Effective search space used:   761025
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)