Query= MSMg01no482_n16.b1 MSMg01no482_n16.b1 CHROMAT_FILE:
MSMg01no482_n16.b1 PHD_FILE: MSMg01no482_n16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:51 2005
(644 letters)
>mm_chr7_50958921_50959964
Length = 1044
Score = 1230 bits (636), Expect = 0.0
Identities = 642/644 (99%)
Strand = Plus / Plus
Query: 1 caggctcttcatagtctggacatactatataatctgggctgcagtgatggctcggtgggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggctcttcatagtctggacatactatataatctgggctgcagtgatggctcggtgggt 260
Query: 61 caaggtactgccacatctagaaatctgtagtcaatttctaggactcacatggaaaaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaggtactgccacatctagaaatctgtagtcaatttctaggactcacatggaaaaagaa 320
Query: 121 gaaaaatcctgtaagttgttctctgactttacaagtggtccaggcatgcccaccccctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaaaatcctgtaagttgttctctgactttacaagtggtccaggcatgcccaccccctac 380
Query: 181 catacacaaaataaataaataaataaattattaaaaagtcatgttatctgctcgaagcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catacacaaaataaataaataaataaattattaaaaagtcatgttatctgctcgaagcca 440
Query: 241 tctatcttcccagcccccaaagaatgttgcttgtttttttgttttgtatctgggtcaata 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctatctccccagcccccaaagaatgttgcttgtttttttgttttgtatctgggtcaata 500
Query: 301 gaatagttttgatcctctattctgtcagtgtggcacatcatcacctttattgatttttac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaatagttttgatcctctattctgtcagtgtggcacatcatcacctttattgatttttac 560
Query: 361 atattgaaatatctttttctcccaggaataaatctgactcgatcaggacatgcgatccct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atattgaaatatctttttctcccaggaataaatctgactcgatcaggacatgcgatccct 620
Query: 421 cgatgctgttcagctgtgttttctagtttctttgttgaggacatcagcatctctgctcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cgatgctgttcagctgtgttttctagtttctttgttgaggacatcagcatctctgctcat 680
Query: 481 taggaatatccatacatgattttcttgtcttatggtgcatgtctggtctgtggggactga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 681 taggaatatccatacatgattttcttgtcttatggtgcatgtctggtctgtgggggctga 740
Query: 541 aaagtctgtgacagcatgatatagactctcatatatagccgtctataagccctatgggga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaagtctgtgacagcatgatatagactctcatatatagccgtctataagccctatgggga 800
Query: 601 aaaggagacataagacactgcaggcttgggtagctgtggagccc 644
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaaggagacataagacactgcaggcttgggtagctgtggagccc 844
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_n16.g1 MSMg01no482_n16.g1 CHROMAT_FILE:
MSMg01no482_n16.g1 PHD_FILE: MSMg01no482_n16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:51 2005
(546 letters)
>mm_chr7_51128229_51129174
Length = 946
Score = 957 bits (495), Expect = 0.0
Identities = 520/529 (98%), Gaps = 2/529 (0%)
Strand = Plus / Minus
Query: 1 tctggctctctgcttccactgtgctacactgccaccttgtggcgccagacggacacacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tctggctctctgcttccactgtgctacactgccaccttgtggcgccagacggacacacag 535
Query: 61 cgatggtggtgataaacgggagattccctgggccagtttctccaggacccagcaccttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 cgatggtggtgataaacgggagattccctgggccagtttctccaggacccagcaccttgc 475
Query: 121 tccaactgggaacctagatgggttattttcactccagcttgaatcttctcattgtgtcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tccaactgggaacctagatgggttattttcactccagcttgaatcttctcattgtgtcca 415
Query: 181 ggtcctgaccttgagtctctcagagaaaaagtgaagggctcagtgtgagatgggacagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ggtcctgaccttgagtctctcagagaaaaagtgaagggctcagtgtgagatgggacagga 355
Query: 241 gctgaggggcttgtggctcagtcttggctttgctcagcgagccaatgatggcatctgggt 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 354 gctgaggggcttgtggctcagtcttggctttgctcagtgagccaatgatggcatctgggt 295
Query: 301 gttgagtgagtttcccatgggtatatctagcaatgttttgtactcacgagagttcagcag 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 294 gttgagtgagtttcccatgggtatatctagcaatgttttgtactcacgagagttcaacag 235
Query: 361 caggcaactgcagtccctgctaacattaccgggggagtcacatggagttttgctaagaca 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 caggcagctgcagtccctgctaacattaccgggggagtcacatggagttttgctaagaca 175
Query: 421 gacttactgactgaagcaagacacatagagagacaagacccatagaagacaagtgatgtt 480
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 174 gacttactgactgaagcaagacacatagagaggcgagacccatagaagacaagtgatgtt 115
Query: 481 tgcagggagtacaaataaattcaacagagaga--ccagggtgggttagg 527
||||||||||||||||||| |||||||||||| || ||||||||||||
Sbjct: 114 tgcagggagtacaaataaactcaacagagagagaccggggtgggttagg 66
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space: 501696
Effective search space used: 501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
