Query= MSMg01no483_d10.b1 MSMg01no483_d10.b1 CHROMAT_FILE:
MSMg01no483_d10.b1 PHD_FILE: MSMg01no483_d10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:20 2005
(603 letters)
>mm_chr7_74064193_74065196
Length = 1004
Score = 1046 bits (541), Expect = 0.0
Identities = 586/601 (97%), Gaps = 3/601 (0%)
Strand = Plus / Minus
Query: 5 gaattccatcccatggaaagccacatctctgcattttcgccctatttaatacagcccagc 64
||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 804 gaattccatcccatggaaaaccacatctctgcattttcaccctatttaatacagcccagc 745
Query: 65 catcatggaaccttagaagagaacctgacagaaaagaaatgagtcaaggtgaactttgtc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 catcatggaaccttagaagagaacctgacagaaaagaaatgagtcaaggtgaactttgtc 685
Query: 125 ctccagggtaagtggttttagttatgggcacccagacacatcccaaacacaaagtgctta 184
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 684 ctccagggtaagtggttttagttacgggcacccagacacatcccaaacacaaagtgctta 625
Query: 185 cacggtagcatagctttcaagccagacaggtgccccccccg-ccccc-ggaggctcttac 242
||| ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||
Sbjct: 624 cacagtagcatagctttcaagccagacaggtcccccccccgacccccaggaggctcttac 565
Query: 243 aagaatgagctgaggattgaaagaactcacaagcacagacaaagccacatcatcagacac 302
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aagaatgagctgaggattggaagaactcacaagcacagacaaagccacatcatcagacac 505
Query: 303 aggaagtacacatgcacactctgacttgaacacttgcaccaggcatgtacacgtgtacat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aggaagtacacatgcacactctgacttgaacacttgcaccaggcatgtacacgtgtacat 445
Query: 363 gtgtgtgtatatgaacgggcacatattcacttacattttttcctgccaccattctcctag 422
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 444 gtgtgtgcatatgaacgggcacatattcacttacattttt-cctgccaccattctcctag 386
Query: 423 gccattctggcaacagccatatggggagacaagggcagcatgggcctggggctacccaca 482
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gccatactggcaacagccatatggggagacaagggcagcatgggcctggggctacccaca 326
Query: 483 tctcctatgttctgaaacatggcagcccttacacatggccttttaaaagaccctcccagc 542
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 325 tctcctatgttctgaaacatggcagcccttacacatggcctattagaagaccctcccagc 266
Query: 543 atctaagtacaagctaatcagcattttaaataggttctaccaacatgtaatgctaactgg 602
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 265 atctaagtacaagcgaatcagcattttaaataggttctaccaacatgtaacgctaactgg 206
Query: 603 g 603
|
Sbjct: 205 g 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1004
Length adjustment: 10
Effective length of query: 593
Effective length of database: 994
Effective search space: 589442
Effective search space used: 589442
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_d10.g1 MSMg01no483_d10.g1 CHROMAT_FILE:
MSMg01no483_d10.g1 PHD_FILE: MSMg01no483_d10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:20 2005
(336 letters)
>mm_chr7_74021093_74021828
Length = 736
Score = 611 bits (316), Expect = e-179
Identities = 331/336 (98%)
Strand = Plus / Plus
Query: 1 ttcagctgcctgaagatttttgtggcttccttgttgaagatgaaaggccttctggtaaaa 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcagctgcctgaagatttttgcggcttccttgttgaagatgaaaggccttctggtaaaa 260
Query: 61 gcaacaatggtcagggtctccatgggggattccaggtgcagagaagggcagatggctcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaacaatggtcagggtctccatgggggattccaggtgcagagaagggcagatggctcta 320
Query: 121 caggtttttgtttgccttgtcttgctctggttgaaacatgagcacattaattaatttctt 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 caggtttttgtttgccttgtcttgctctggttgaaacatgaacacattaattaatttctt 380
Query: 181 cccccaagctgtgtgtcggtggaatgttctatcctgcccctcacccccacccccacctgt 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccccaagctgtatgtcggtggaatgttctatcctgcccctcacccccacccccacctgt 440
Query: 241 cttccatcaacttagaagataaagctgtcaggcaccagtagcccaggctaatctctcagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttccatcaacttagaagataaagctgtcaggcaccagtagcccaggctaatctctcagc 500
Query: 301 taaggactttgctgaagggggtggaaaaaaacccag 336
||| ||||||||||||||||||||||||| ||||||
Sbjct: 501 taaagactttgctgaagggggtggaaaaagacccag 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
