Query= MSMg01no483_o16.b1 MSMg01no483_o16.b1 CHROMAT_FILE:
MSMg01no483_o16.b1 PHD_FILE: MSMg01no483_o16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:17 2005
(172 letters)
>mm_chr7_136443013_136443584
Length = 572
Score = 290 bits (150), Expect = 3e-83
Identities = 165/170 (97%), Gaps = 2/170 (1%)
Strand = Plus / Minus
Query: 4 ggaattcctccat-cctctccccactattaatttctgctccaattatgtagaaatatgaa 62
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggaatttctccatccctctccccactattaatttctgctccaattatgtagaaatatgaa 313
Query: 63 cttgccagatcattgacttggtccaaatttctgactcagcacttgcctgttgggtagcat 122
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 312 cttgccagatcattgacttggtccaaatctctgactcagcacttgcctgttgggtaccat 253
Query: 123 gacaagagtcatttagccttttctgagatttcacatcctggtaggcttag 172
||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 252 gacaagagtcatttagccttttctgagatttcacatcct-gtaggcttag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 172
Length of database: 572
Length adjustment: 8
Effective length of query: 164
Effective length of database: 564
Effective search space: 92496
Effective search space used: 92496
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no483_o16.g1 MSMg01no483_o16.g1 CHROMAT_FILE:
MSMg01no483_o16.g1 PHD_FILE: MSMg01no483_o16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:17 2005
(169 letters)
>mm_chr7_136266313_136266881
Length = 569
Score = 317 bits (164), Expect = 2e-91
Identities = 167/168 (99%)
Strand = Plus / Plus
Query: 1 caataaacgagagacataattggaattttgaagctacactgatgcacagaaaccaagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caataaacgagagacataattggaattttgaagctacactgatgcacagaaaccaagctc 260
Query: 61 actcttggaagcagaaaacattttctaggaagaaaaagaaaaaccccacagctgcaccta 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 actcttggaagcagaaaacattttctaggaagaaaaagaaaaaccccatagctgcaccta 320
Query: 121 ggaagagagagattccagatttgtgctttgctgagatgatttgctgtg 168
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaagagagagattccagatttgtgctttgctgagatgatttgctgtg 368
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 569
Length adjustment: 8
Effective length of query: 161
Effective length of database: 561
Effective search space: 90321
Effective search space used: 90321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
