Query= MSMg01no490_b08.b1 MSMg01no490_b08.b1 CHROMAT_FILE:
MSMg01no490_b08.b1 PHD_FILE: MSMg01no490_b08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:33 2005
(676 letters)
>mm_chr7_37238518_37239593
Length = 1076
Score = 1191 bits (616), Expect = 0.0
Identities = 661/676 (97%)
Strand = Plus / Minus
Query: 1 aaaaagtcccctacacacatcacacagatgtgtccagaggctctagcctaggaactaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 aaaaagtcccctacacacatcacacagatgtgtccagaggctctagcctaggaactaacc 893
Query: 61 atgtgttcccatctgtgtgccttgtctgtaagaagtatctgtccagccgcagagaagttc 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 892 atgtgttcccatctgtgtgccttgtctgtaagtagtatctgtccagccgcagagaagttc 833
Query: 121 taaagggtggtgagacacagtgcacccaccctgacaggttgctaaggcttggccaattga 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 taaaggatggtgagacacagtgcacccaccctgacaggttgctaaggcttggccaattga 773
Query: 181 acttgttaagttagaatgttcaatggcagaacactttcatagtatgctcaaggccctggg 240
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 772 acttgttaagttagaatattcaatggcagaacacttgcatagtatgctcaaggccctggg 713
Query: 241 tttgctcttttgtacccaaagaaacaaataacaaaattatccagtggcagctgttgctat 300
||||||| | | ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 712 tttgctcctaagcacccaaagaaacacataacaaaattatccagtggcagctgttgctat 653
Query: 301 ttttctaggttaggatgaaaagaggagggtatttacgtcaatgaaagagctccagaagtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ttttctaggttaggatgaaaagaggagggtatttacgtcaatgaaagagctccagaagtc 593
Query: 361 aacgctttagaattcgttttgagttgtgtgtgggcttaggtgcgtatgcttgcctgtgca 420
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 592 aacgctttagaatttgttttgagttgtgtgtgggcttaggtgcgtatgtttgcctgtgca 533
Query: 421 ggtgtgtctacaagccagaggttaacatccagtgttgttatctactgttctctgagctag 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 532 ggtgtgtctacaagccagaggttaacatccagtgttgttatctactgttctctgagttag 473
Query: 481 tttgctttccattgctgtgatgaaatgttctgactcagtgcaacttgggaaggaaaaggt 540
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 472 tttgctttccattgctgtgatgaaatgttctgactcaatgcaacttgggaaggaaaaggt 413
Query: 541 ttattccagttttacactagcctaacacagttcattaccaagggaagttgaagctagact 600
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 412 ttattccagttttacactagcctgacacagttcattaccaagggaagttgaagcgagact 353
Query: 601 caagacaaggattgaagcagaaaccatagaggacagctactgactggctcactctcagtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 caagacaaggattgaagcagaaaccatagaggacagctactgactggctcactctcagtt 293
Query: 661 agcttttcttacatag 676
||||||||||||||||
Sbjct: 292 agcttttcttacatag 277
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space: 709956
Effective search space used: 709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_b08.g1 MSMg01no490_b08.g1 CHROMAT_FILE:
MSMg01no490_b08.g1 PHD_FILE: MSMg01no490_b08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:34 2005
(606 letters)
>mm_chr7_37106798_37107802
Length = 1005
Score = 1116 bits (577), Expect = 0.0
Identities = 599/609 (98%), Gaps = 7/609 (1%)
Strand = Plus / Plus
Query: 1 agcattcctttggaaggctggaagtagtgggtgtgtggccagcacagggtacatgcatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcattcctttggaaggctggaagtagtgggtgtgtggccagcacagggtacatgcatcc 260
Query: 61 ttcttcactgtcctgtcgtagctctgccactgt---ctacaaggtctctggggtaagagg 117
||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 261 ttcttcactgtcctgtcgtagctctgccactgtcccc--caaggtctctggggtaagagg 318
Query: 118 ataatagatctttagctctggatttttcttacatgccctgggagggttgcccccccccac 177
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 319 ataatagatctttagctctggatttttcttacatgccctgggagggttg--cccccacac 376
Query: 178 acactccgttgcttactggaggtaaaagaccaccagcgtccagcagccccctcctgttcc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 acactccgttgcttactggaggtaaaagaccaccagcgtccagcagccccctcctgttcc 436
Query: 238 cagcttctgagttacttctcattcacatttgtggcccagctctggcttttatagtgtcag 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cagcttctgagttacttctcattcacatttgtggcccagctctggcttttatagtgtcag 496
Query: 298 tttcacctaaccatgatcttggccattgcattcctcgcatcccacctactagacaaacat 357
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 497 tttcacctaaccatgatcttggccattgcattccttgtatcccacctactagacaaacat 556
Query: 358 cccctgaatttatagctgtaaatatttgtgaaagaagatctccctggaggcttggacgac 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cccctgaatttatagctgtaaatatttgtgaaagaagatctccctggaggcttggacgac 616
Query: 418 aggggatttaggtttcaggagcactgatgccatcaccccctcacttgtgtatcctgcttg 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aggggatttaggtttcaggagcactgatgccatcaccccctcacttgtgtatcctgcttg 676
Query: 478 caatagccctccgctgtcaccgtggctacagatgtttagagttatgttaagctaggttac 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 caatagccctccgctgtcaccgtggctacagatgtttagagttatgttaagctaggttac 736
Query: 538 agctatgctaagccttctaggtctccccatattgggagcccataacagggctcatctgcc 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 agctatgctaagccttctaggtctccccatattgggagcccataacagggctcatctgcc 796
Query: 598 ttgggcagc 606
|||||||||
Sbjct: 797 ttgggcagc 805
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1005
Length adjustment: 10
Effective length of query: 596
Effective length of database: 995
Effective search space: 593020
Effective search space used: 593020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
